| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0825 |
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| Symbol | |
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| ID | 3707110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 897955 |
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| End bp | 899760 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637737327 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_342868 |
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| Protein GI | 77164343 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCTA AACTTAACTC CAGTATCTCC CCAGAGACCG CAGGCACCCT AGTTGGCCTA
TTCCAAGAAC GGGTACGGCG TACCCCTAAC GCTGTTGCCT ACCGGCATTT CGATCCCAAA
CAAAGGAGCT GGCAAGAGAC TACTTGGGCT GAAATGGCCA CCGAGGTCAC TCGTTGGCAG
GCAGCGCTCT CCAAGGAAGA GCTAAATCCT GGGGACCGGG TTGCTCTTAT GCTCCGCAAC
AGCCGGGAAT GGGTATTCTT TGAACAGGCT GCCCTAGGTC TAGAATTGGT GGTGGTGCCC
CTCTATATTA ATGATCGCCC CGATAATGTT CGCTATATTT TGAAAAACGC CGAAGTCAAA
CTGCTGATGA TAGAAGGGTA TCACCAATGG CAGGAAATAA AACAATGGTG GGCGCTACGT
AAACTAGTGC GCGTGATCTC ATTAAATCCT TTTGATGATG AAGCCCGTGG TCAAAAACGC
CTCTGCTATT TACAAGAATG GTTACCTAAA ACTGCAGATA AACACTACCC TAAACTCAAT
AACCCTGATG CCCTTGCTAC TATAGTTTAT ACTTCTGGCA CGACGGGTTT ACCCAAAGGC
GTTATGCTAA GCCACCATAA TATTCTATGG AATGCTCATA GCAGCTTGCA GAGTACACCA
ATATACGAGG ATGATTTGTT CCTTTCCTTC CTACCCCTCT CCCATTCCCT GGAACGCACT
CTCGGTTATT ATTTACCCAT GATGGCCGGA GCCCAGGTAG CTTATACCCG CTCCATTGCT
AAGCTGGCGG AAGATCTGGT TACTATTAAA CCCACGGTCC TTGTAAGTGT TCCGCGCATC
TTCGAGCGTG TTCATAACCA GATCTACGAT AAACTTCGAG AGAAAACCCT ATTAGAACGA
GCGCTATTCA AGCTTGCCAT TGCTGCTGGC TGGCGTCAAT TCAATTACCA ACAAGGACGT
GCTCCTTGGC ATCCTCTCTG CCTTTTAAAT CCTCTCCTGA GGCAAATCGT GGGCCGCCAA
GTTTTGGCCC AGTTCGGTGG CCGTCTCCGG ATCGTCGTTT GCGGGGGTGC CCCACTGGTC
TTTAATGTCG CCCGGGAATT ACTTGCTCTG GGATTACCCC TTATTCAGGG ATACGGGCTT
ACCGAGGCTA GCCCTGTTAT CAGCGGAAAT TCCTTAAATA ACAATGACCC CAAGAGCGTT
GGCACCCCCT TGCAAGATGT GGAAATCCGT ATTGGCGAGC ATAATGAACT GCTAGGGCGC
AGCCCAGGAG TGATGCTAGG TTACTGGAAT AATCCTAAAG CAACCGCCGA AGTCATCGAT
GAGGAAGGTT GGCTGCATAC TGGTGACCAA GCCCGTATTG AACAAGGACG TCTCTATATC
ACCGGGCGCA TTAAAGAAAT CATTGTGCTA GCTACCGGCG AGAAAGTCCC CCCCGGCGAA
ATGGAAACGG CTATCGGCAC TGATCCCTTA TTTGATCAAG CCATGGTTGT TGGCGAAGGG
AAGCCCTACC TAAGCGCACT GATAGTAGTC AATCCAGAAC ACTGGAACAC GCTTGCACAG
GAGTTAAATC TTGATCCTCA CCAAAAACAG TCCCTTGAGC ATCCTGCCGT GCTTGAGGAG
GTACTAGAAC GGATCGAGCA ACATACCCGT CAATTTCCCG GCTATGCGCG TATTCGCCGG
GCCGCTTTAA CCCAAGAACG CTGGACTACA GAAAATGGCC TTGCCACCGC AACGCTGAAA
GCACGCCGTA AACAGGTAAT CAAGCATTAT CGTAATCAAA TTAGCGCTTT ATATGAAGGA
CATTAA
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| Protein sequence | MAAKLNSSIS PETAGTLVGL FQERVRRTPN AVAYRHFDPK QRSWQETTWA EMATEVTRWQ
AALSKEELNP GDRVALMLRN SREWVFFEQA ALGLELVVVP LYINDRPDNV RYILKNAEVK
LLMIEGYHQW QEIKQWWALR KLVRVISLNP FDDEARGQKR LCYLQEWLPK TADKHYPKLN
NPDALATIVY TSGTTGLPKG VMLSHHNILW NAHSSLQSTP IYEDDLFLSF LPLSHSLERT
LGYYLPMMAG AQVAYTRSIA KLAEDLVTIK PTVLVSVPRI FERVHNQIYD KLREKTLLER
ALFKLAIAAG WRQFNYQQGR APWHPLCLLN PLLRQIVGRQ VLAQFGGRLR IVVCGGAPLV
FNVARELLAL GLPLIQGYGL TEASPVISGN SLNNNDPKSV GTPLQDVEIR IGEHNELLGR
SPGVMLGYWN NPKATAEVID EEGWLHTGDQ ARIEQGRLYI TGRIKEIIVL ATGEKVPPGE
METAIGTDPL FDQAMVVGEG KPYLSALIVV NPEHWNTLAQ ELNLDPHQKQ SLEHPAVLEE
VLERIEQHTR QFPGYARIRR AALTQERWTT ENGLATATLK ARRKQVIKHY RNQISALYEG
H
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