Gene Noc_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0820 
Symbol 
ID3707105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp893355 
End bp893993 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID637737322 
Producthypothetical protein 
Protein accessionYP_342863 
Protein GI77164338 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.187346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAG ATATTTACGC ATCAGATCAG GAAAAAAGTG AAGCTATCAG ACAATGGTGG 
CGGGAAAATG GTCGAGCCGT CCTTGTAGGG CTTATTATCG GGCTTTTAGC TCTCTTAGGT 
CTACGGAGTT GGACAAACTA CGAGCAAAGC CGTACCAGCG AGGCATCGTC ACTCTATCAG 
CAGATATTGG CGGCCAAGGA TCAGGACGCT AATGCCGAAA TTTACAATAG CGCGGAGCAC 
CTTCTTCAAG AGTACAGCGA TACTCCCTAT GGGTTGTTCA GTGTATTGAT ACTGGCTAAG 
GAAGATCAAG CCCGTGGCGA TCTTGAGACT GCCACCGAAC GCCTTAAGGG GGCGCTAGAG 
TATGCGCGAC ACCCTAGTCT TCAAAAAGTA ATATACTTAC GTCTTGCGCG TTTGTTGCTA 
GCAATGGGCA GCCCTCAAGA AGTGCTAACG ATGTTAGCTG AGGTTAAGCC GGGCAGTTTT 
TCCTCTGCTT ATGCTGAATT GCGCGGCGAT GCTTATGTAG CGCTGGGCCA ACCATCAGAA 
GCACAACTAG CCTATCAAGA GGCGTTACTG GGTTTGGGGC CAAGTGAGCA GTACCGGCAG 
ATACTACAAA TGAAGCTTGA CAATCTTGCT CAACCTTAA
 
Protein sequence
MALDIYASDQ EKSEAIRQWW RENGRAVLVG LIIGLLALLG LRSWTNYEQS RTSEASSLYQ 
QILAAKDQDA NAEIYNSAEH LLQEYSDTPY GLFSVLILAK EDQARGDLET ATERLKGALE 
YARHPSLQKV IYLRLARLLL AMGSPQEVLT MLAEVKPGSF SSAYAELRGD AYVALGQPSE 
AQLAYQEALL GLGPSEQYRQ ILQMKLDNLA QP