| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0814 |
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| Symbol | |
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| ID | 3707099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 886153 |
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| End bp | 887334 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637737316 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_342857 |
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| Protein GI | 77164332 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGGGG TCAGCATACT GGGATCTACG GGTTCCATTG GTATGAGCAC CCTTGATGTA
CTGGCGCGTT ATCCAGAACG CTACAGGGTT CAAGCCTTGT CCGCGAACAG ATCCGTAGCA
CAGATTTACC AGCAGTGCCT CCAATTTCGA CCTTCTCAGG TTGTTATGGT CGATCCTGAT
GCTGCTGAGC AGCTACGCCA GCGGTTGCAT CCCGTCGTGC CGGAGATAGA AGTCAGTAGC
GGCAGCGAAG CCTTAGAGAC CATTGTCACA TCTCCTGATA CTGATTATGT CATGGCGGCC
ATTGTAGGCG CTGCTGGCTT ATTGCCCACC TTAGCCGCAG CGCGAGCAGG CAAGCGGATT
TTGCTTGCTA ATAAAGAATC TCTTGTGATG AGCGGTCAGT TATTTATGAG TGCTGTTAGT
GAAAGCGGTG CCGAGTTGCT CCCCATTGAC AGCGAACATA ACGCCCTTTG GCAATGTATG
CCAGCGGAGG GGCGCGAACT TCCCTTGCAC CGTAAAGGCG TACGGCGTAT TTTACTGACG
GCCTCGGGCG GGCCCTTTAG AGAGCGGGCA CTTTCCGAGT TGGACAATGT TACCCCTGAT
GAGGCGTGCG CGCATCCTAA CTGGAGTATG GGACGTAAGA TATCGGTTGA TTCGGCTACC
ATGATGAACA AAGGGCTAGA GGTTATTGAA GCCTGCTGGT TATTTGATGC TGCGGCCTGT
CAGATTGAAG TCGTTTTGCA TCCGCAGAGC GTTATTCACT CCATGGTGGA TTATGTGGAC
GGTTCTGTCT TGGCACAGTT GGGTAATCCT GATATGCGGA CACCCATTGC TTATGGATTG
GCTTGGCCTG AGCGTATGGA ATCGGGGGTA ACACTTTTGG ATCTGTTTGC GATAGGCCAA
TTGACTTTCT GTCAACCTGA TTTGCAACGC TTCCCTTGCC TGGGGCTGGC CTATGCCGCG
CTGGAGCGGG GAGGCACCTG TAGCACTATT TTGAACGCAG CTAATGAAGT GGCGGTCCAG
GCGTTTCTCG ATCAACGTAT TCAGTTTACC CAGATTCCAA AGCTTATCGA ATGGACGCTA
GGTAGAGTGA CCCCCACCGT GGCTGACTCT CTTCCGGCCG TGCTAGAAAG TGACGCAGTG
GCGCGGCAAG TAGCTAAAGA ACAAGTAGAG CGGTGGTATT AA
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| Protein sequence | MIGVSILGST GSIGMSTLDV LARYPERYRV QALSANRSVA QIYQQCLQFR PSQVVMVDPD
AAEQLRQRLH PVVPEIEVSS GSEALETIVT SPDTDYVMAA IVGAAGLLPT LAAARAGKRI
LLANKESLVM SGQLFMSAVS ESGAELLPID SEHNALWQCM PAEGRELPLH RKGVRRILLT
ASGGPFRERA LSELDNVTPD EACAHPNWSM GRKISVDSAT MMNKGLEVIE ACWLFDAAAC
QIEVVLHPQS VIHSMVDYVD GSVLAQLGNP DMRTPIAYGL AWPERMESGV TLLDLFAIGQ
LTFCQPDLQR FPCLGLAYAA LERGGTCSTI LNAANEVAVQ AFLDQRIQFT QIPKLIEWTL
GRVTPTVADS LPAVLESDAV ARQVAKEQVE RWY
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