| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0802 |
|---|
| Symbol | |
|---|
| ID | 3707068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 875268 |
|---|
| End bp | 875765 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637737304 |
|---|
| Product | riboflavin synthase |
|---|
| Protein accession | YP_342845 |
|---|
| Protein GI | 77164320 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0054] Riboflavin synthase beta-chain |
|---|
| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.594455 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGCC ATATCAAAAC CATTACTGGA GATTATGTGA TCCGGAATTT ACGGATAGGT
ATTGCGGCTG CGCGGTTTAA TGAATTTATC GTCGCTAGTT TGCTGGAGGG GACCGTGGAT
ACTTTACTTC GCCATGGGGT TACCTCCAAG GATATCGAAA TTGTTCGCGT TCCTGGCGCA
TTTGAGTTGC CGCTGGCAAT TCAAGCCATG GCGCAGCGAG GCGGCTTTGA TGCCTTAGTA
GCTTTAGGGA CGGTTATCCG CGGCGCGACC CCCCACTTTG ATTATGTCGC TGGGGAATGC
AGTAAGGGGT TGGGGTTGAT TTCCTTGCAG CATAGCTTAC CCATTGGTTT TGGCGTGCTG
ACAGTGGATA CCATTGAACA GGCTATTGAG CGGGCGGGCA CTAAAGCCGG AAACAAAGGG
GTAGAGGCCG CGCTTTCTGT GATTGAGATG GTTGGCGTAT TGCGACAAAT TCATAGCGCC
AAAGGCGAAA TAACGTGA
|
|---|
| Protein sequence | MKSHIKTITG DYVIRNLRIG IAAARFNEFI VASLLEGTVD TLLRHGVTSK DIEIVRVPGA
FELPLAIQAM AQRGGFDALV ALGTVIRGAT PHFDYVAGEC SKGLGLISLQ HSLPIGFGVL
TVDTIEQAIE RAGTKAGNKG VEAALSVIEM VGVLRQIHSA KGEIT
|
|---|
| |