Gene Noc_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0800 
Symbol 
ID3707066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp873039 
End bp873812 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content49% 
IMG OID637737302 
Producthypothetical protein 
Protein accessionYP_342843 
Protein GI77164318 
COG category[L] Replication, recombination and repair 
COG ID[COG3298] Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTT TTGTCTTTGA TATCGAAACG GTCCCGGATG TAGAAGGGGC GCGCCGTTTC 
TATGGCTTGG AGGGTTTGGA TGATGCCGCG GTGGCTGAAA TTATGTTTTC TAAACGTCGC
CAGGAGACGG GGGGCGGGGA GTTTTTGCGT TTACATTTGC ACCGCATCGC CGCTATTTCC
GTGGCGCTCC GTTCCCAGGA CCGGTTTAAA GTTTGGTCAT TAGGCGATCC TGCCTCTCCG
GAGGAAGAGT TAATACAGCG TTTCTTTGAT GGAATCGAAA AATTTGTACC CACCCTGGTT
TCTTGGAATG GGAGCGCCTT CGATCTTCCG GTGATACACT ACCGCGCTTT GCTTCATGGT
ATTGGGGGCG CGCGTTATTG GGAGATCGGC GAGAAGGAGC AAAGCTTTCG CTGGAATAAC
TATCTGAATC GTTATCACCA GCGCCACTTA GATTTGATGG ATGTGTTGTC TGGCTACCAG
ACTCGAGCCG TGGCCCCGTT GGATGAAATT GCGACATTAC TTGGCTTTCC CGGTAAAATG
GGGATGAGTG GCGCTAAAGT ATGGGATTTA TTTCAAAGCG GTGAGCTTGA GGCAATTCGC
AATTACTGTG AAACTGATGT ACTGAATACC TACCTTGTCT TCTTGCGATT TGAACTCATA
CGGGGACAGC TTGAGAAAGC CACCTATCAG CAGGAATGTC AACGGGTGCG GGAGGTGATA
GGGGCTGAGA ACAAAACTCA TTTTTCGGAA TTTTTGGCCC TCTGGAATAT TTAA
 
Protein sequence
MNVFVFDIET VPDVEGARRF YGLEGLDDAA VAEIMFSKRR QETGGGEFLR LHLHRIAAIS 
VALRSQDRFK VWSLGDPASP EEELIQRFFD GIEKFVPTLV SWNGSAFDLP VIHYRALLHG
IGGARYWEIG EKEQSFRWNN YLNRYHQRHL DLMDVLSGYQ TRAVAPLDEI ATLLGFPGKM
GMSGAKVWDL FQSGELEAIR NYCETDVLNT YLVFLRFELI RGQLEKATYQ QECQRVREVI
GAENKTHFSE FLALWNI