Gene Noc_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0793 
Symbol 
ID3707059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp866222 
End bp867217 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content53% 
IMG OID637737295 
Productpeptide chain release factor 2 
Protein accessionYP_342836 
Protein GI77164311 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGGTTG ACCGGGAGTT AGCCGTTCCT TCTGTTTGGG ACGAACCGGA GCGGGCGCAA 
CAGCTAGGTC AAGAGCGCGC GCAATTGCAG TCGGTGGTAG CTCCATTGGC GGAATTGGGC
GGGGAAATCA TCCAGGTTAG GGAATTGTTT GAGCTCGCCA TGGAAGAAGG CGATGAAGAC
ACTGCCCAGG AAATAATCGC TGAACTAGAC GTTGTGGAAC AACGTTTAGC AAAGTTGGAA
TTCCAGCGCA TGTTTGCCGG TGAAATGGAC CCTAACAATG CCTATCTAGA TATTCAAGCC
GGCTCTGGCG GGACCGAAGC CCAGGATTGG GCTAATATGC TGCTAAGAAT GTATTTGCGC
TGGGGAGAAA AGCATAGCTT TAAAACGGAG CTGACCGAAG TCTCTGAAGG GGAGGTTGCC
GGGATCAAGA GTGCCGCTAT TCGTTTCGAG GGAGAATACG CTTTTGGTTG GTTGCGGACT
GAAACCGGGG TCCACCGGCT AGTGCGTAAA TCACCTTTTG ATTCGGGTAA CCGCCGGCAT
ACTTCTTTTG CCTCGGTATT CGTCTATCCA GAAGTGGATG AAAGGATAGA TATTGAGATC
AACCCAGCAG ATTTGCGTAT TGATACCTAC CGGGCCAGCG GCGCAGGTGG ACAGCATGTT
AATCGGACCG ACTCGGCGGT GAGAATTACC CACTTGCCTT CCAGTCTGGT GGTCCAGTGT
CAAAGCGAGC GGTCCCAACA TCAGAATAAG GCCCACGCTA TGGCCCAGCT TCGCGCCAAG
CTCTATGAGT TGGAGATGCG CAACCGCCAA GCCGAGAAAC AGGCGGCGGA GGAGGCCAAG
GCGGATATTG GCTGGGGAAG CCAGATTCGC AACTATGTAT TGGATCAGTC CCGGATCAAG
GATTTGCGCA CGGGAATTGA AGTAGGGAAT ACTCAAGGGG TATTGGATGG TGATTTGGAC
TCATTTATCG AGGCAAGCCT CAAAAGTGGG TTTTAG
 
Protein sequence
MEVDRELAVP SVWDEPERAQ QLGQERAQLQ SVVAPLAELG GEIIQVRELF ELAMEEGDED 
TAQEIIAELD VVEQRLAKLE FQRMFAGEMD PNNAYLDIQA GSGGTEAQDW ANMLLRMYLR
WGEKHSFKTE LTEVSEGEVA GIKSAAIRFE GEYAFGWLRT ETGVHRLVRK SPFDSGNRRH
TSFASVFVYP EVDERIDIEI NPADLRIDTY RASGAGGQHV NRTDSAVRIT HLPSSLVVQC
QSERSQHQNK AHAMAQLRAK LYELEMRNRQ AEKQAAEEAK ADIGWGSQIR NYVLDQSRIK
DLRTGIEVGN TQGVLDGDLD SFIEASLKSG F