Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0792 |
Symbol | |
ID | 3707058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 865218 |
End bp | 865991 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637737294 |
Product | peptidase M23B |
Protein accession | YP_342835 |
Protein GI | 77164310 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.814248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGTTGT TTTTACCAGC CTTAGTTATG ATTGCTTTTT TGGCTGCTTG TAGCAGCGGT GGGAGGGTAG CTCCCGTTCA TCATCTTGGC GCTGTTCCCC ATGTGGGCCC CCGCCCATCC CATTATACGG TGAGACGGGG AGATACCTTA TATTCCATTG GCTGGAGATA TGGGGTGCAT TACCGCACGC TTGCCCATTG GAATGCTATT CGCCCTCCTT ATACGATCTA TGTAGGGCAA AAACTACGTC TAAACTCTCC CTCCAAGAGC GCAGCCAAGC CGAAACAAGC ATCCGAGAAT AAGAAGTCTG TTACCAAATC GACAGCCTCA CCCCCACTAA CCAAGATTAA AGCTGTTCCA GCTAAAAAAG CATTGTCCCT GGAAAGGCCA ACTAAGGTCG CTCATGGTAT TCGCTGGTAT TGGCCCACCC AGGGGGAAGT TATTCAGAAC TTCTCCCGCA CCGAAGCTGG TCGTAAAGGG GTAGATATTG CCGGGGAATT AGGCCAGCCA GTGGTTGCAG TAGCTGATGG TAAGGTCGTT TATAGTGGGC GGGGACTGCC CCGCTATGGG AAGCTAATTA TCGTCAAGCA CGATGCTAAC TTTCTCAGCG CCTATGCCCA TAACCGGTTG CTAGTAAGCA AAGAAGGCGA TTCCGTAAAA GGCGGACAGA AGATTGCTGA AATGGGGCGT AGTGGGACTG ATCGGGTTAA GCTGCATTTT GAGATTCGCC ATCATGGGCA GCCCGTGGAC CCCTTGCGCT ATTTGCCTGA ATAG
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Protein sequence | MRLFLPALVM IAFLAACSSG GRVAPVHHLG AVPHVGPRPS HYTVRRGDTL YSIGWRYGVH YRTLAHWNAI RPPYTIYVGQ KLRLNSPSKS AAKPKQASEN KKSVTKSTAS PPLTKIKAVP AKKALSLERP TKVAHGIRWY WPTQGEVIQN FSRTEAGRKG VDIAGELGQP VVAVADGKVV YSGRGLPRYG KLIIVKHDAN FLSAYAHNRL LVSKEGDSVK GGQKIAEMGR SGTDRVKLHF EIRHHGQPVD PLRYLPE
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