Gene Noc_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0790 
Symbol 
ID3707056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp863901 
End bp864542 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content52% 
IMG OID637737292 
Productprotein-L-isoaspartate(D-aspartate) O-methyltransferase 
Protein accessionYP_342833 
Protein GI77164308 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.745112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGATGA CTTCCCGGCG GGCTCGAGAG CGAGAGCGGT TGATTCAGCG ATTACATGAA 
GAGGGTATTC GTGATCCTGC TGTGCTCAAG GTAATCCAGG AAACGCCCCG CCATATTTTT
GTTGATGAGG CGCTTTCTAG CCGAGCCTAT GAAGATACCG CGCTTCCTAT CGGTTTTAGA
CAAACGATTT CCCAGCCTTA TATCGTGGCC CGTATGACAG AAGCTCTCCT TGCTGGAGGA
TCGCTCCAGA AAGTGTTGGA GGTGGGTACA GGCTCTGGCT ATCAGACAGC TATTTTAGCG
GGCTTGGCAG GTCTGGTTTA TACGGTGGAA CGAATCAAGC CGCTGCTGAC GCAAGCCCAG
GCCCGCTTTA AGCATCTTGG GATAAGCAAT ATCCGGGCTA AATGCGCCGA TGGGCTTTGG
GGGTGGCCGG CCTATGGGCC TTATCAAGGG ATATTGGTGG CCGCGGCGCC TAGGGAAATC
CCTCAGACTT TGCTTAAACA ATTAGCTGTC GGGGGGCGGA TGGTAATTCC GGTAGGGGCA
TCGTCTGGTA CCCAGTCCTT AATGATTGTG ACTAGAACGG CTGATGATTT TGAAATGAAA
ACTTTAGAGC GGGTTAGTTT CGTGCCGCTT GTAGGAGAGT AA
 
Protein sequence
MGMTSRRARE RERLIQRLHE EGIRDPAVLK VIQETPRHIF VDEALSSRAY EDTALPIGFR 
QTISQPYIVA RMTEALLAGG SLQKVLEVGT GSGYQTAILA GLAGLVYTVE RIKPLLTQAQ
ARFKHLGISN IRAKCADGLW GWPAYGPYQG ILVAAAPREI PQTLLKQLAV GGRMVIPVGA
SSGTQSLMIV TRTADDFEMK TLERVSFVPL VGE