Gene Noc_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0786 
Symbol 
ID3707052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp859961 
End bp860740 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content49% 
IMG OID637737288 
Producthypothetical protein 
Protein accessionYP_342829 
Protein GI77164304 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGTA AACTAAGAAT TCCAATAATT TTAATGGCGT TAAGTATGAC TTCTACCGTC 
CATGCTGTTC CGACCTTGCA AGTCGGTGTT CCCGGCGGCG TCGGTGAAGG AGCGTATGGG
GATTATCAGG GAAGCACATT CAATCCGGTA GAAGAAGACA CCGCCATTAC CAATGGAAAT
AGTCTTTTTG TGGCGGGTGT TTACAAGCCC AATACGCGAT TTCTAGGAGG ACAGTTTTCA
GGGGGGGATA ACTGGAGTGA TTTTGGCTAT GACAGCAGTT TTGATACTCG TGGAGCCGTA
TTGCTAGCCG CGGTTCCTGA CGGCACCCTG AGCGCAGCTG ATGCCAGTTT AACAATTAAT
GGTTTAGGGT CATTCTTTAG GTTGCCGAAT CTGGGCAGTC TTTTCCCTAA CCGCCATGAT
CCCCTCAAAG ATGATATTTC GGATTTCCTG TTTTATGATA TTGGCGATTT TGCTAAAAAT
AGCGGGGCTG TCCCTAATTT TGCGGATGAA ACGGGGGCAG CGGATGGGGA AATCAAAACC
CTTACCATCG CTGGCGCCAG TGGCCTGGAT TGGATCCATT TTGATGTGCT AGCCCTGGAA
ACCCGTCAGC AAGGCGGGGG CAGGTTTAGA ACCTCCTTGG CCAATAACCC TGGATCCCAT
GATGTAACTT GGAATCAAGG CGGTGGAGGG TTGCAACAAA TTCCTGAGCC CAGCGTCCTC
GCCCTTTTTG GCGTTGGTTT TCTAGGCTTG GGTTTCTGTA GGCGTTATCG TCTGCATTAA
 
Protein sequence
MLSKLRIPII LMALSMTSTV HAVPTLQVGV PGGVGEGAYG DYQGSTFNPV EEDTAITNGN 
SLFVAGVYKP NTRFLGGQFS GGDNWSDFGY DSSFDTRGAV LLAAVPDGTL SAADASLTIN
GLGSFFRLPN LGSLFPNRHD PLKDDISDFL FYDIGDFAKN SGAVPNFADE TGAADGEIKT
LTIAGASGLD WIHFDVLALE TRQQGGGRFR TSLANNPGSH DVTWNQGGGG LQQIPEPSVL
ALFGVGFLGL GFCRRYRLH