Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0780 |
Symbol | |
ID | 3707046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 853120 |
End bp | 853851 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637737282 |
Product | isochorismatase hydrolase |
Protein accession | YP_342823 |
Protein GI | 77164298 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.473619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCATT CCAACGCACC CTTAAAGGAA AGTTTTGATC CACTGCGGGC CAGCTACCGG GAAACCGTTA CCGAAATTCC CGCCGTGGTG GAATCCCTGG AAAAGCGCCA CACTGCACTG CTGGTGGTAG ACTTACAATA CCTGGATGCC GCGCCTGGCT ATGGGGTTTT CTCCCATTTA TCCAAGGGGA AGGTTTCTAA AGACACCCCC GAATTTTATT ATTTCGATCA GCTCGAGCGG ATCGTCCTAC CCAACGTGCA GCGTCTGCAA ACCGCCTTTC GGGCCAATAA CCTGGAAGTG ATCCATACCC GTATTCAGTC CTTGACCAAA GATGGCCGTG ATCGCGGCCC GCAACACAAA CGCTTGGGGC TCCATGCCCC CGCTGGTTCC AAGGAGGCTG AATTTCTGCC AGCAATCGCC CCCCGGGGAG ATGAGATCAT CATCAACAAA ACCGCCAGTG GCGTTTTTAA TGCCACTAAT TTGTCCTACA TCTTGCACAA TCTGGGAATT ACGGGCCTGT TTGTGGCGGG AGTCTATACC AATGAATGCG TCTCCACGGC TATTCGCGAC GCCTGCGATT TAGGTTTTTT CACCACCCTG ATCGAGGATG CTTGCACGAC CGTCACTCCA GAGCTGCAAA AGGCGACCCT GCGTGCCCTG AAAGATCGCT ATGCCCGAGT CTTGTCTACT GACGAGGCCA TTGCGGAAAT CAATCAGGTA GTGGCCGCGT GA
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Protein sequence | MTHSNAPLKE SFDPLRASYR ETVTEIPAVV ESLEKRHTAL LVVDLQYLDA APGYGVFSHL SKGKVSKDTP EFYYFDQLER IVLPNVQRLQ TAFRANNLEV IHTRIQSLTK DGRDRGPQHK RLGLHAPAGS KEAEFLPAIA PRGDEIIINK TASGVFNATN LSYILHNLGI TGLFVAGVYT NECVSTAIRD ACDLGFFTTL IEDACTTVTP ELQKATLRAL KDRYARVLST DEAIAEINQV VAA
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