| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0776 |
|---|
| Symbol | |
|---|
| ID | 3707042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 847438 |
|---|
| End bp | 848325 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637737278 |
|---|
| Product | dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | YP_342819 |
|---|
| Protein GI | 77164294 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACAGCA CTCAGAGACG GATACTTTTA ATAGGCGCCA CAGGTCAGGT GGGTTGGGAG
TTACAGCGGA CCCTAGCGCC CTTGGGGGAA GTATTTGCTC CGGGGCGGGA GCGCCTGGAT
CTGGCCCAAT TGGACAGTAT TCGCCCTTGC CTTGCCGAGA CCCAGCCGGC CTTGATCGTC
AATGCCGCAG CTTATACCGC CGTGGATAAG GCAGAGGAGG AACCGGAGCA AGCGTTGGCC
ATTAATGGCA AGGCTCCTGG CGTATTGGCG GAAACGGCCC GCCAGCAGGG CGCGGCGTTT
ATTCATTATT CTACCGACTA TGTGTTTGAT GGAAAAAAGG CCGCCCCCTA TCGCGAGAGT
GATACTCCCC GGCCGTTGAA TGTTTACGGC CAAACCAAGC TGACGGGAGA GCAAGCTATT
GTCGCCGTGG GTGGAGCCTA TTTAATTTTG CGCACCAGTT GGGTCTATGG GCTGAGGGGA
CATAATTTTT TATTGACCAT GCAGCGTTTG GCCCGGGAAA GGGAAGTGCT TAGGGTGGTG
GATGATCAAT GGGGCGCACC TACCTGGAGC CGCTTGATTG CGGAAGGAAC GGCGCAAATC
ATTGCCCAGT CCTGGGGTCA TAGGCAGAAC TATATTCCCC TACAGACAGG TATTTACCAC
CTAAGCTGTG GGGAAAAGAC GACTTGGCAT GGTTTTGCGC AGACTATTTT GACGCGCCTA
GCGCAAGGGG CGGGATCGGT AGCGAAGCTA AAAGCTATTT CTGCCGCGGA TTATCCGACC
GCCGCCCGGC GTCCCGCCTT CTCCTGTTTG GACAATACGC TGGCACGGGA TACCTTTGGC
ATTCAACTGC CAAGCTGGCG GACGGCATTG GAATTGGCGC TTTCATAG
|
|---|
| Protein sequence | MNSTQRRILL IGATGQVGWE LQRTLAPLGE VFAPGRERLD LAQLDSIRPC LAETQPALIV
NAAAYTAVDK AEEEPEQALA INGKAPGVLA ETARQQGAAF IHYSTDYVFD GKKAAPYRES
DTPRPLNVYG QTKLTGEQAI VAVGGAYLIL RTSWVYGLRG HNFLLTMQRL AREREVLRVV
DDQWGAPTWS RLIAEGTAQI IAQSWGHRQN YIPLQTGIYH LSCGEKTTWH GFAQTILTRL
AQGAGSVAKL KAISAADYPT AARRPAFSCL DNTLARDTFG IQLPSWRTAL ELALS
|
|---|
| |