Gene Noc_0775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0775 
Symbol 
ID3707041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp846896 
End bp847441 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content55% 
IMG OID637737277 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_342818 
Protein GI77164293 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAA CCTCAACTTC GCTCCCTGGC GTTTTGTTGA TCGAACCCCG CGTCTTTGGC 
GATGAGCGAG GGTTTTTCTT TGAAAGCTAT AATCGGGCCG CCTTTGCGGC GGCAACCGAT 
ACCCAGGTCG AGTTTGTGCA GGATAACCAT TCTCGCTCGC TCCAGCATGT TCTACGGGGC 
CTGCACTACC AAATTTGCCA ACCCCAGGGG AAGTTGGTTC GGGTGGTTGC CGGTGAAGTT 
TTTGACGTAG CCGTTGATCT GCGGCGCCGT TCTCCTGGCT TTGGCCGTTG GGTAGGTTAC 
CGCCTCTCGG CGGAAAACAG GCACCAGCTT TGGATACCGG GAGGATTTGC CCACGGTTTT 
TTGGTTTTAA GCGAGTATGC GGAATTTTTG TATAAAACCA CCGCCTACTA CGCGCCGGAG 
TACGAGCGCT GCATTCGCTG GGATGATTCC GATCTGGCCA TTGACTGGCC CTTGGATGGA 
AGGCCGCTCA TTTCCGCCAA GGATCAAGCC GGTTGTGCTT TTAACGAGGC GGAGCTGTTT 
CCGTGA
 
Protein sequence
MKATSTSLPG VLLIEPRVFG DERGFFFESY NRAAFAAATD TQVEFVQDNH SRSLQHVLRG 
LHYQICQPQG KLVRVVAGEV FDVAVDLRRR SPGFGRWVGY RLSAENRHQL WIPGGFAHGF 
LVLSEYAEFL YKTTAYYAPE YERCIRWDDS DLAIDWPLDG RPLISAKDQA GCAFNEAELF 
P