| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0773 |
|---|
| Symbol | |
|---|
| ID | 3707039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 844930 |
|---|
| End bp | 846006 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637737275 |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_342816 |
|---|
| Protein GI | 77164291 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.781884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAC AACCGCTTTT GATTACCGGG GGCGCCGGTT TTATTGGTTC TACCGTGGTG
CGGCATTTTC TTGCAGCCAC GGAGCGGGGG GTGATTAATG TGGATAAACT CACCTATGCC
GGTAATCCGG AGTCCCTGGA AGACCTTGCT TCTCACCCTC GCTATGAATT TGTCCATGCC
AATATCTGCC AGCGGGAGGC TATGACGCAA ATATTTGCCC GCTACCAGCC GGGTGCGGTG
CTGCACCTGG CTGCCGAATC CCATGTGGAT CGCTCCATTG ATAACCCGGC AGCTTTTATC
GACACCAATG TGACCGGGAC TTATATTTTG CTAGAAGCAG CCTTGGACTA TTGGCGGAAG
CTTGATAAAA GCGCTCAAGC CCGGTTTCGT TTTCACCACA TCTCCACCGA TGAAGTGTTT
GGTTCTTTGG GCGCAACGGG GCTGTTCCGG GAAGACTCTC CCTATCAGCC CAATTCCCCC
TACGCCGCGA GCAAGGCCGC CTCGGATCAC CTTGTACGGG CCTGGTATCA TACTTATGGA
TTGCCGGTTT TGATTACTAA TTGCTCCAAT AATTACGGTC CCCGCCAATT TCCGGAAAAA
CTTATCCCCC TGATGGTTCT CAATGGCATG GAGGGCAAAT CCCTGCCGGT GTATGGCGCT
GGCGATAATG TGCGGGATTG GTTGTATGTG GAAGACCATG TGCGGGCGCT GGAAACCGTC
CTTAACAAGG GACAGCCGGG AGAAACCTAT AATATTGGCG GGTACAATGA AAAAACCAAC
GTCGAGGTAG TAGAACTCAT TTGCCAATTT CTTGATGAAC TGCTTCCCCA ATCCCCTCAC
CGGCCTCACC GTTCCCTCAT TACCTTTGTA GCGGATCGGC CCGGCCATGA CCAGCGATAT
GCCATCGATG CGGGAAAAAT AGCCTGTGAA CTGGATTGGC GGCCCCGGGA AACCTTCGAG
ACTGGGTTGC GCAAGACGGT GCAATGGTAT CTGGATAATC AGAATTGGTG CCGGCGGGTA
TTGGATGGCA GTTATCGCCG GGAGCGTTTA GGCATCAAGG GTCAAGCCCA TGCGTAA
|
|---|
| Protein sequence | MIQQPLLITG GAGFIGSTVV RHFLAATERG VINVDKLTYA GNPESLEDLA SHPRYEFVHA
NICQREAMTQ IFARYQPGAV LHLAAESHVD RSIDNPAAFI DTNVTGTYIL LEAALDYWRK
LDKSAQARFR FHHISTDEVF GSLGATGLFR EDSPYQPNSP YAASKAASDH LVRAWYHTYG
LPVLITNCSN NYGPRQFPEK LIPLMVLNGM EGKSLPVYGA GDNVRDWLYV EDHVRALETV
LNKGQPGETY NIGGYNEKTN VEVVELICQF LDELLPQSPH RPHRSLITFV ADRPGHDQRY
AIDAGKIACE LDWRPRETFE TGLRKTVQWY LDNQNWCRRV LDGSYRRERL GIKGQAHA
|
|---|
| |