Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0767 |
Symbol | |
ID | 3707033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 835319 |
End bp | 836233 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637737269 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_342810 |
Protein GI | 77164285 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00516189 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGTTG GATTTAAAAG TGGAATCACA TCAATCCTAA TTTTGTCCGC ACTGGTGGCT TTCAGCGCAA GGGCGGCGGA GCCAGAGGAA GAGGTACTGA TTCAGTATAA GGATGTGGTG GTGACACCGG CGGATTTTCA AGCGGAGTTG GAAACGATAC CGGAACAATA CCGGGCCAAT GTGGCCGCCA GCGGGGAGCG TATTCACCAA TTACTGGACA AAATATTCGT CTACCGGGTG CTGGCCAGGG AAGCCCAGGA ACAGGGTCTG GACCAAAACC CTGAAGTCCA ACAGGAACTC AAGCTGGAGA AGGAAGAAAT TCTAGGCAAG GCCCGCCTCC GGCAGTTGCG ACAGCAAGCC CTGGCGGACA ATCCGGATTT CGAGACCCTG GCTCGGGAGC GTTATCAGGC TAACCCGGAA AAATACCAGC AGCCGGAGCG AGTAAAAGTC TCCCACATTC TAATCAAGAC CGAAGAGCGT TCCGAGGAAG AAGCCAAGAA ACTGGCGGAG AAAGTCCGCC AACTAGCCCT CACGGAAGAA AAGCCCTTTT CGGAATTGGC CCTTGAGTAT TCGGAAGACC CTTCTCTTGA AAAAAATAAA GGGGATTTAG GATTTATCGT TAAGGGCGTG ACCACCAAGC CCTTTGAGGA GGCCGCCTTT GCCCTGGAAC AACCGGGAGA GATTAGCCCG GTCGTGAAAA GCCGGTTTGG ATTTCATATT ATCCGCCTGG AGGAACGGCA AGCCCCAAAA ACGAAATCTT TTGAAGAGGT TAAGGAAAGA TTGGTGGAGA AAATTAGAGA AACCCACTTG AACCAGGTGG TGCAAACTCA TCTCAATCAA ATCCGCAATG CCGAAGGCAT CCAGATGAAT CGGGAAGCCT GGCAAAAGCT GAAGCCAACA CCTTCCGCCC ATTAA
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Protein sequence | MQVGFKSGIT SILILSALVA FSARAAEPEE EVLIQYKDVV VTPADFQAEL ETIPEQYRAN VAASGERIHQ LLDKIFVYRV LAREAQEQGL DQNPEVQQEL KLEKEEILGK ARLRQLRQQA LADNPDFETL ARERYQANPE KYQQPERVKV SHILIKTEER SEEEAKKLAE KVRQLALTEE KPFSELALEY SEDPSLEKNK GDLGFIVKGV TTKPFEEAAF ALEQPGEISP VVKSRFGFHI IRLEERQAPK TKSFEEVKER LVEKIRETHL NQVVQTHLNQ IRNAEGIQMN REAWQKLKPT PSAH
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