Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0723 |
Symbol | |
ID | 3706989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 781682 |
End bp | 783016 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637737226 |
Product | two component, sigma-54 specific, Fis family transcriptional regulator |
Protein accession | YP_342767 |
Protein GI | 77164242 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00153946 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGGAC GCCCCGTGGT CCTTATAGTG GACGATGAGC CGGATATTCT GGAATTACTG GAGCTTACCC TGGCGCCCTT GGGTGTTGTC TGCCAAAAAG CGAGTGATCT TGCCAGGGCC CGTCAGCATC TGCAGCAACA GTCCTTCGAT TTCTGTTTGA CTGATATGCG TCTTCCGGAT GGAGATGGCA TCGAGCTGGT TAGGCTGATT AGTCAGTACT GCCCGGAAAC GCCAGTGGCG GTGATTACCG CCCATGGCAA CGTGGAGACT GCCGTTGCGG CCTTGAAAGC TGGCGCTTTT GATTTTATCT CAAAACCGGT GGATTTACAG GCGCTGCGCA ATCTGGTCAA GAGGGCGCTA AAACTTCCTC TTTCCTATCC CAAAATGGAA AGGCGAACCC GCCACCGGTT ACTTGGGGAG TCGGCCGCCA TGCGGGGAGT GCGCGCCCAA ATTGCCAAGC TGGCCCGTAG TCAAGCGCCG GTTTACATTA GTGGCGAATC GGGCACGGGT AAGGAACTAG TTGCTAGGCT TATCCATGAG CAAGGGCCCC GTTCGGCGGG TTCCTTCGTA CCTGTCAATT GCGGCGCTAT ACCCACCGAG CTGATGGAAA GTGAATTTTT TGGTCATAAA AAGGGCAGTT TTAGTGGCGC TGTTGGTGAT CAGGAGGGGT TGTTTCACGC CGCGGATGGG GGCACCCTGT TTTTGGATGA AGTGGCCGAT TTATCTCTCC CCATGCAGGT CAAGCTTCTG CGGGCTATCC AGGAGAAGAG CGTGCGGCCC ATCGGCAGCC AGAAAGAAAT TGCCGTTGAT GTCCGTATTC TTTGTGCTAC CCATAAAGAT CTGGCTACCT TGGTGCGACA AGGCAACTTT CGCCAGGATC TTTTCTACCG GCTCAATGTT ATTGAATTGG CTGTTCCTTC CTTGAGACAG CGGACAAGTG ATATTTTCCA GCTAGCCGGA CACATCTTGA ACAGGCTCGC CGAGACCCAT GGGGATACTC CTTTTAAACT GGCGCCCGAT GCTTTGGCAG CGTTGCAAGC TTATCTCTTT CCCGGCAATG TGCGAGAGCT GGAAAATATT TTGGAGCGGG CCGTAACACT ATGCGAATCC GAAACCATTG GGGCAAAGGA TCTGCGCTTG CCCCAAGTAG AATTGCCTAG TACCTCAGCA TTCCTTCCTG CAAATTCTTT AGAAGAGCAT TTAGCGGGAT TAGAAAAACA GGCTATTCTC CAAGCTCTCG AACAAACCCG CTACAATAAA ACCGCTGCTG CTAAAATTCT AGGCATTACC TTCCGCGCCT TACGTTACCG GTTAAAAAAA CTGGAGCTAG AATAA
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Protein sequence | MKGRPVVLIV DDEPDILELL ELTLAPLGVV CQKASDLARA RQHLQQQSFD FCLTDMRLPD GDGIELVRLI SQYCPETPVA VITAHGNVET AVAALKAGAF DFISKPVDLQ ALRNLVKRAL KLPLSYPKME RRTRHRLLGE SAAMRGVRAQ IAKLARSQAP VYISGESGTG KELVARLIHE QGPRSAGSFV PVNCGAIPTE LMESEFFGHK KGSFSGAVGD QEGLFHAADG GTLFLDEVAD LSLPMQVKLL RAIQEKSVRP IGSQKEIAVD VRILCATHKD LATLVRQGNF RQDLFYRLNV IELAVPSLRQ RTSDIFQLAG HILNRLAETH GDTPFKLAPD ALAALQAYLF PGNVRELENI LERAVTLCES ETIGAKDLRL PQVELPSTSA FLPANSLEEH LAGLEKQAIL QALEQTRYNK TAAAKILGIT FRALRYRLKK LELE
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