Gene Noc_0720 details

Gene Information

• Locus tag: Noc_0720
• ID: 3706986
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 777994
• End bp: 779823
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637737223
• Product: GTP-binding protein TypA
• Protein accession: YP_342764
• Protein GI: 77164239
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000568805
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCGATA AACTACGTAA TATCGCTATC ATTGCTCATG TGGACCACGG CAAAACCACC 
TTGGTCGATC AATTGCTTAA GCAGTCTGGC ACTTTTGATG AGTGGGAGAC TGTGGCTGAA 
CGGGTACTCG ATTCCAATGA TTTAGAACGG GAACGAGGAA TTACTATCCT TGCCAAGAAT 
ACTGCCATCG AATGGAACGG TTACCGGATT AATATTGTAG ATACCCCTGG TCATGCCGAT 
TTCGGTGGCG AGGTAGAACG GGTGCTGTCC ATGGTGGATT CTGTGCTATT ACTGGTGGAT 
GCCGTAGAGG GTCCGATGCC CCAGACTCGG TTTGTGACCC AGAAGGCTTT TGCTCTGGGT 
CTTCGCCCTA TTGTGGTGAT TAATAAAATT GATCGGCCGG GCAGTCGCCC CAATTGGGTG 
CTGGATCAAA CGTTTGATCT GTTCGACCGC CTTGGCGCAA CCGAGGAGCA GCTAGATTTC 
CCGGTGGTTT ATGCTTCTGC GCTTCAAGGC TATGGGGCCT TGTCGCCGGA GGTGCGTACT 
GGAGATATGA CCCCTTTATT TCAGACCATC GTTCAATGCG TCCCCCCCCC GCGGGTAAAC 
CTAGAAGGCC CCTTCCAAAT GCAAATCAGC AGTCTGGATT ATAGTCCTTA CGTAGGGGTG 
ATCGGCATTG GTCGCATTCA GCGGGGTGCG GTTAGTACCA ACACCCCCGT GGAGATTTTG 
GATAGGGAAG GTCAGCGGCG CAGGGGACGG GTGCTGCAAG TCATGGGTTT TAGGGGGTTG 
GAACGGGTTG AGGTGCCTGA AGCCCAGGCG GGGGATATTA TCGCGGTTTC GGGCATCGAT 
AATCTGCGAA TCTCTGATAC CCTTTGCGAC CCTGCCCAGG TTGAGGGGTT GCCGCCTTTA 
ACGGTGGATG AACCTACCGT GAGCATGACC TTTCAGGTAA ATAATTCTCC TTTTGTCGGC 
CGGGATGGAA AATATGTAAC CAGCCGACAG TTACGGGAGC GTTTACTCAG AGAGCTGATC 
CATAATGTTG CCCTGCGCGT TGAGGAAGGT GAAGACCCGG ATAAATTCAA GGTCTCGGGA 
CGAGGCGAGC TCCACCTTTC CATCCTTATT GAGAATATGC GGCGGGAAGG GTATGAATTG 
GGTGTGTCCC GGCCCGAGGT GATCGCCAAG GAAATCGAGG GGGAACTGTG TGAACCTTAT 
GAACAGCTCG TGGTGGATGT GGAGGAGCAG CATCAAGGCG CCGTAATGGA AAAACTGGGT 
GAGCGCAAAG GAGATCTTGT GGATATGGTG CCCGATGGCA AGGGACGGGT GCGTTTGGAA 
TACTCTATCT TATCCCGCGG CCTCATTGGT TTTCAGACCG AATTTCTGAC GGCAACTTCG 
GGCACCGGTT TAATGCACCA TGTTTTCGAC CGGTACGGGC CTATTAAAAA AGGCACCATT 
GCCCATCGCA AGAATGGGGT TTTGGTAGCC AACGGTGTTG GAAAAGCTTT GGGATATGCC 
TTGTTTAATT TACAAGAGCG GGGGCGGCTC CTCATCGGGC CGGGCACTGA AGTTTATGAG 
GGCATGATCA TCGGTATTCA TTCGCGGGAG AACGATCTGG TTGTTAATCC TCTAAAAGCT 
AAGCAGCTTA CCAATATCCG TGCGGCTGGA AGCGATGAGA ATATCTTGCT GACTCCCCCC 
TTACGATTGA GTTTGGAGCA AGCCTTGGAG TTTATCGATG ACGACGAATT GGTCGAGGTG 
ACCCCCGAGC ATATCCGCTT ACGCAAGAAA TTTTTGCTGG AACACGAAAG GAAACGGGCC 
GCGCGGAGCA AAGTGGCGGC AGAAGGGTAG 

 

Protein sequence

MVDKLRNIAI IAHVDHGKTT LVDQLLKQSG TFDEWETVAE RVLDSNDLER ERGITILAKN 
TAIEWNGYRI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVEGPMPQTR FVTQKAFALG 
LRPIVVINKI DRPGSRPNWV LDQTFDLFDR LGATEEQLDF PVVYASALQG YGALSPEVRT 
GDMTPLFQTI VQCVPPPRVN LEGPFQMQIS SLDYSPYVGV IGIGRIQRGA VSTNTPVEIL 
DREGQRRRGR VLQVMGFRGL ERVEVPEAQA GDIIAVSGID NLRISDTLCD PAQVEGLPPL 
TVDEPTVSMT FQVNNSPFVG RDGKYVTSRQ LRERLLRELI HNVALRVEEG EDPDKFKVSG 
RGELHLSILI ENMRREGYEL GVSRPEVIAK EIEGELCEPY EQLVVDVEEQ HQGAVMEKLG 
ERKGDLVDMV PDGKGRVRLE YSILSRGLIG FQTEFLTATS GTGLMHHVFD RYGPIKKGTI 
AHRKNGVLVA NGVGKALGYA LFNLQERGRL LIGPGTEVYE GMIIGIHSRE NDLVVNPLKA 
KQLTNIRAAG SDENILLTPP LRLSLEQALE FIDDDELVEV TPEHIRLRKK FLLEHERKRA 
ARSKVAAEG