Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0710 |
Symbol | |
ID | 3706958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 769437 |
End bp | 769976 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637737213 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_342754 |
Protein GI | 77164229 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0086052 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTC CAGAACAAAA ACTCCAACGG TTTGTAACTT TTGCCGATAA ATTAAGCGCT AGGATAGGCC ACCTAGTTGC CTGGCTAGTC CTGCTTTTGG TGTTATTAGT CTGTTATGAC GTCAGCATGC GCTACCTTTT CCACAACGGC TCGGTGGCCT TGCAGGAATT GGAATGGCAT CTCTTTGCCC TTATCTTTTT ATTGGGCGCC GCGCCCACCT TAAAGGATGA TGGCCACGTG CGGGTCGATA TTTTTCATCA GGATAAATGG TTAAGCCTCC GAGCGCGAAT CTGGATCAAT CTCCTCGGCA CCCTTATCTT TCTTCTCCCT TTCTGCCTCA TCATTATTAC CGCTTCCTGG CCTTTTGTCC GTAATGCCTT TTTGCAAAAC GAAGGCTCTC CTGATCCCGG TGGCCTCCCT GATCGCTATC TTCTAAAAGC GGTCATTCCC CTTGCCTTTA GTTTGCTCGC ACTCCAAGGC GTAGCTGATT TTATCCGCAA CTTACTAAAG CTGCGGCACA TTTCGGAGAC CACCCAATAA
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Protein sequence | MEFPEQKLQR FVTFADKLSA RIGHLVAWLV LLLVLLVCYD VSMRYLFHNG SVALQELEWH LFALIFLLGA APTLKDDGHV RVDIFHQDKW LSLRARIWIN LLGTLIFLLP FCLIIITASW PFVRNAFLQN EGSPDPGGLP DRYLLKAVIP LAFSLLALQG VADFIRNLLK LRHISETTQ
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