Gene Noc_0710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0710 
Symbol 
ID3706958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp769437 
End bp769976 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content48% 
IMG OID637737213 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_342754 
Protein GI77164229 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0086052 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTC CAGAACAAAA ACTCCAACGG TTTGTAACTT TTGCCGATAA ATTAAGCGCT 
AGGATAGGCC ACCTAGTTGC CTGGCTAGTC CTGCTTTTGG TGTTATTAGT CTGTTATGAC
GTCAGCATGC GCTACCTTTT CCACAACGGC TCGGTGGCCT TGCAGGAATT GGAATGGCAT
CTCTTTGCCC TTATCTTTTT ATTGGGCGCC GCGCCCACCT TAAAGGATGA TGGCCACGTG
CGGGTCGATA TTTTTCATCA GGATAAATGG TTAAGCCTCC GAGCGCGAAT CTGGATCAAT
CTCCTCGGCA CCCTTATCTT TCTTCTCCCT TTCTGCCTCA TCATTATTAC CGCTTCCTGG
CCTTTTGTCC GTAATGCCTT TTTGCAAAAC GAAGGCTCTC CTGATCCCGG TGGCCTCCCT
GATCGCTATC TTCTAAAAGC GGTCATTCCC CTTGCCTTTA GTTTGCTCGC ACTCCAAGGC
GTAGCTGATT TTATCCGCAA CTTACTAAAG CTGCGGCACA TTTCGGAGAC CACCCAATAA
 
Protein sequence
MEFPEQKLQR FVTFADKLSA RIGHLVAWLV LLLVLLVCYD VSMRYLFHNG SVALQELEWH 
LFALIFLLGA APTLKDDGHV RVDIFHQDKW LSLRARIWIN LLGTLIFLLP FCLIIITASW
PFVRNAFLQN EGSPDPGGLP DRYLLKAVIP LAFSLLALQG VADFIRNLLK LRHISETTQ