| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0687 |
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| Symbol | |
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| ID | 3706935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 743776 |
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| End bp | 744708 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637737194 |
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| Product | Phage integrase |
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| Protein accession | YP_342735 |
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| Protein GI | 77164210 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.004827 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGA AGACCGCTGA TTTCTGGCAG GCACGAAAAG ATTTTCTGGC GCATCTGCAT
TACGCCAAGG GGTACAGTCA GGGGACCTGC TATGCCTACC ACTCGGACCT GGGCATTTGG
GGCCGGTGGC TAGAAGAGGC GAGCAAGGAC TGGCGTCAGG CCACCCATCT GGACACCGAG
CAGTTTGTGG CCTGGCAGAT GCGGAAGCGG GGCACGAAGG CGCACATCGT AGCCCGCCGC
TCCAGTTGCT TGGGCTCATT CTACAAATGG GCCATGAAAA ACGCCCTGGT GGAATCGGAC
CCCATCTATC TGGCCGATAA ACCCAAGCGT CCCTATCGCA TCCCTGTTTG GCTGGAGAAA
GAAGAGCAAC GGGCTTTCCA GGAAGCCGTC CAACGGGTCG AGGACTTACC CGAGAATATC
TTCGGGCGTA CTCAGGAGCA TATTAAAGCG GTCCGGCGTC GCTATGATGT TCTGTTTGGC
CTTATCCTCA ACAGCGGTCT GCGAATCAGT GAAGCCCTGG CGGTGAAAGT CCGGGATGTG
CGTATGGTGA ACGGTGTGGC CAAATCCGTG CGGATCATCG GCAAGGGCAA TCGGGAACGG
CTGGTGCCAC TGCCGGAAGC CTTCGGGCAA GTGTTGGGTG CCTGGCTACA GGGCAGAGGA
GGGGAGGACT TCGTGTTCGC CAAGGCCCCA GGGGAAAAAC CACCCGGACC CCATGCGGTA
CGGGCTTACT TGCGGCGGCT CATTGAGCGG GCGGGCATCG ATAAGCCCGT CACACCCCAC
AAGCTGCGCC ATACCTACGC CACGCGGCTA TTGGAATCCG GTGCCGAGCT GGTGGATATC
CAGGCTTTGC TGGGGCACGT GGACTTATCC ACCACCCAGA TTTACACCCA CGTGAGCGAG
GAGCGGATGG CGGGGATAGT GGCGAAGTTG TAG
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| Protein sequence | MEKKTADFWQ ARKDFLAHLH YAKGYSQGTC YAYHSDLGIW GRWLEEASKD WRQATHLDTE
QFVAWQMRKR GTKAHIVARR SSCLGSFYKW AMKNALVESD PIYLADKPKR PYRIPVWLEK
EEQRAFQEAV QRVEDLPENI FGRTQEHIKA VRRRYDVLFG LILNSGLRIS EALAVKVRDV
RMVNGVAKSV RIIGKGNRER LVPLPEAFGQ VLGAWLQGRG GEDFVFAKAP GEKPPGPHAV
RAYLRRLIER AGIDKPVTPH KLRHTYATRL LESGAELVDI QALLGHVDLS TTQIYTHVSE
ERMAGIVAKL
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