| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0656 |
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| Symbol | |
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| ID | 3706888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 709314 |
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| End bp | 711596 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637737164 |
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| Product | DEAD/DEAH family helicase |
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| Protein accession | YP_342705 |
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| Protein GI | 77164180 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAT ATAACACAAA TGTCTCAATA TTTATAAATT TAGATATAGA TGAAGAGCTG
AGTGCAGAAG AATATGAACT CTATGCTGAC CAGGTCGTCG ACCAAGCCAC CGCGGCTGAA
ACCATCCCAG AGTTAGAAGC GGAAATTCTG ATTCTGAAGG ACCTGGAACA CCAGGCGTTG
GGAGTCGTGC AGTCGGGCAA TGACAAAAAA TGGGAAGAGC TTTCTCATCT GCTGCAGGAC
CGGCCTGAGA TGTACACAGA GTCTGGCAGC CGCCGCAAGC TGATCATCTT CACCGAGCAC
AAGGATACCC TCAATTATCT GGTTGGCCGT ATCCGCGGCA TGTTGGGCAA TCCCGAAGCG
GTTATCACCA TTCACGGTGG CGTCAATCGT GATGATCGAC GTAAGGCTCA GGAAGAATTC
CGCAACAATC GTGATGTGCA GGTGCTCGTG GCCACCGATG CCGCTGGTGA AGGTGTGAAC
CTGCAAAACG CTAACCTGAT GGTCAATTAC GATCTGCCCT GGAACCCCAA CCGCCTGGAA
CAGCGCTTTG GCCGTATCCA TCGCATTGGT CAAACAGAGG TGTGCCACCT ATGGAATCTG
ATCGCCAGTG AAACGAGAGA GGGTGAAGTC TTTCAGCGAT TATTCGACAA AATTGAGATC
GAAAAGAAGG CTCTCGGCGG CAAGGTATTC GACATTCTGG GCGAAGTATT TGAGGGGAAA
TCATTAAAAG ATTTGCTGGT AGAGGCAATC AGGTCTAGCG AATCAGATGA GGCACGTCAC
GCCTATCAGG AGAGTTTCTT TGGCAAGGCT CTGGATACTG AACACCTGAA GGAAATCCTC
CGGCGCAATG CTCTCGTTGA ACAGCATATG AGCCTGGAAG ATCTTTATGC TGTCAAAGAG
GAGATGGAAA AAGCCGAGGC TCGCAAGCTG CAGCCTTACT TTATCCGTGC CTTTTTCACC
GAGGCATTTC AGAACCTCAC CGGCGAAATG CGACCCCGCG AGGCGGGTCG ATACGAGGTG
CGGCATGTGC CGGCCTCTAT TCGCGAGCGT GACCGGATCA TTGGTGAAAG CCGCACACCA
GTATTAAAGA AGTACGAGCG GATCTGTTTC GAGAAAGACC TGGTTCGCGC CCACGGCAAG
CCCATGGCGG ATTTGATCCA CCCCGGCCAT CCGCTGATGC ATGCCACCAC CGACCTGATC
CTCTCAGCAC ACCGCAGCAA GCTCAAGCAA GGTGCGGTAC TGGTGGATTC CAACGATGAC
GGCTTAGAAC CACGAATACT GTTTATGGTG GATCACAGCG TTCGCGAAGC GCCAGCAAAT
GATCAGCACG ATAAGCCCAG AGTGGCTTCA AGGCGCTTGC AGTTCGTGGA GATCGACCAG
CATGGAAAGG CTTTTCACGC CGGCTGGGCA CCGCACCTCG ACCTGCAGCC CATTGATGAT
TACGACCTGA AACTGGTGCA GGACATTCTC AATGCCCCGT GGATCAGTGC AGACCTTGAA
GGCCTGGCAC TCAACCATGC ATCCCAACAC CTGGTGCCGG AACACTACCG GGAGGTGAAA
GCCCGTCGTG AACATCAGGC AGATAAGGTG CTTGCTGCAG TCAATGAGCG GCTGGTCAAG
GAGATCAATT ATTGGTCCGA CCGTTACATC AAACTCAGTG ACGATGTCGC CGCCGGTAAA
CAACCGCGCA TGCAGCCTGA GATGGCGCGC CGCCGGGTAG ATGAACTCAC TGAACGGCTG
AACCAGCGCA AGCGAGAACT GGAGGCCATG AAGGCCGTAG TCTCCAGTAC TCCCGTGGTC
ATTGGTGGCG CGTTGGTCAT TCCGCAAGGT CTGTTGGCGC AACGCAAAGG CGAGACCGCT
TTCTGCGCCG ACGCCGAGGC CCGCGCACGC ATAGAGATGG TAGCGATGAA TGCGGTCATA
GCTGTGGAAC AGGGCTTTGG TCACGAAGTG AAAGATATGT CTGCTGAAAA ATGCGGCTGG
GACGTCACCG CCCGCCCACC CGCCAACCCT GATGGCTCGA TTAAGCCGGA TCGACATATT
GAAGTGAAAG GCCGCGCAAA AGGGCAAAGC ACCATTACGG TCAGCCGCAA TGAAATCATC
TATGCCCTCA ACCAGACGGA TAAATTCCTG CTGGCCGTTG TGATCGTCGA TGGCGACAGC
TTTGATGGCC CCCACTACAT CCGCAACCCT TTCAGTACTG AGCCCGACTT TGGCGTGGCC
AGTATCAACT ATGACTTGAG TGATCTGCTT TCCAAAGCAG TGTCACCGGA ACTGACTCTC
TAA
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| Protein sequence | MNEYNTNVSI FINLDIDEEL SAEEYELYAD QVVDQATAAE TIPELEAEIL ILKDLEHQAL
GVVQSGNDKK WEELSHLLQD RPEMYTESGS RRKLIIFTEH KDTLNYLVGR IRGMLGNPEA
VITIHGGVNR DDRRKAQEEF RNNRDVQVLV ATDAAGEGVN LQNANLMVNY DLPWNPNRLE
QRFGRIHRIG QTEVCHLWNL IASETREGEV FQRLFDKIEI EKKALGGKVF DILGEVFEGK
SLKDLLVEAI RSSESDEARH AYQESFFGKA LDTEHLKEIL RRNALVEQHM SLEDLYAVKE
EMEKAEARKL QPYFIRAFFT EAFQNLTGEM RPREAGRYEV RHVPASIRER DRIIGESRTP
VLKKYERICF EKDLVRAHGK PMADLIHPGH PLMHATTDLI LSAHRSKLKQ GAVLVDSNDD
GLEPRILFMV DHSVREAPAN DQHDKPRVAS RRLQFVEIDQ HGKAFHAGWA PHLDLQPIDD
YDLKLVQDIL NAPWISADLE GLALNHASQH LVPEHYREVK ARREHQADKV LAAVNERLVK
EINYWSDRYI KLSDDVAAGK QPRMQPEMAR RRVDELTERL NQRKRELEAM KAVVSSTPVV
IGGALVIPQG LLAQRKGETA FCADAEARAR IEMVAMNAVI AVEQGFGHEV KDMSAEKCGW
DVTARPPANP DGSIKPDRHI EVKGRAKGQS TITVSRNEII YALNQTDKFL LAVVIVDGDS
FDGPHYIRNP FSTEPDFGVA SINYDLSDLL SKAVSPELTL
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