Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0646 |
Symbol | |
ID | 3706878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 693062 |
End bp | 694483 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637737154 |
Product | hypothetical protein |
Protein accession | YP_342695 |
Protein GI | 77164170 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.896972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATGG TCACCAGTAA TCGTTTGTTA CCTCTTCTTG CCGGCTCCGT TGTGCTGATG GCAGTGCTAG TTGCAGTGAA GTCCTGCTCC CCGAATGAGG AGCAACCTCA GCTTTTGGAA GCCGTGCCAC AAGCGCCGAA ACCGGATGCC GATACACCCG CAGACACCAT CAAGACCCTG ACGGCGAATG TCAGCGCCAT GACCTCGGAA CTCAATGCCC TGCGTCGGGA TAACACCGCG CTCAAACAGG AGAATCGCGA TCTGATCAAA GACAGAAAGC AGATAGAAAA CAACGTGCTG TCGAGAGTGC AGACAGCATT GGAGACAAAG CGCATGGACG CAGCCCCCAC CGAAACCACG TCAGCCATCG CTGCGCTGAC GGCGAGGGTG GATTCGCTGA CTAACCGGTT TGGAACTTCA TCTACACGGC CGTCTTCTAC GGGTTCTGAT ATTCCGATCG GACTCGGTCT GGATGGCATT GGAACATCGG CCGCGGAATC GGAATCACTG GTGTGGGTCA ATCCCCTGGA GTTCACACCA TCGCCTGACG GTGATAAGGA GACGTTGCTC AACCGCTTCA GTCGCACCAG TCGTAATGCG TTAGATGGCA CTCGTCCGGA AGTGCAATCG CTTGTGGCGA AAGGTTCCGA TGCCCTCAAT ACCGCACTGC CGGTCTACAC CGTGCCGCGC AATGCCACGC TGATTGGATC CACTGGCATG ACCGCATTGG TGGGCAGGGT GCCTATCCAG GGGCAGGTCC GCGACCCCAT GCCGTTCAAG GTGATTACCG GCAAGGAAAA CCTCGCCGCC AATGGTCTGC GCATCCCAGG CGTCGAAGGC ATGATCTGGA GTGGCACGGC GATCGGTGAT TGGACGCTCT CCTGCGTGAC CGGGAAATTG GAATCGGTGA CCTTTGTTTT CGAGGACGGC ACCATCCAGA CCTTGTCCAG TGACGAGAAT CAGTTGGGTG GTTCCAGTGG AAACAGCGAT AGACCCCTGG GTTGGATTTC CGATGCGCGG GGTATTCCCT GTATCACGGG TGAGCGCAAG ACCAACGCAC CGGCGTTCCT GGCACAGCGC ATTGGAGTGA TGGCGCTCCA GGCTGCCGGT GAAGCTGCGG CGCAGTCCGA AACCACAACC CTGATCAGCG ACTCGGGTAC CGCCACCAGC GTGGTCTCGG GTGAGACGGG CAAATACGTC TTGGGTAAAA CATTAGGCGG GGGCAGCGAC GAAGTCGCTC AGTGGTTGCG GGAGCGTCAG GCTCAGAGCT TCGATGCGGT ATTTGTGCCC GCGGGTATCG AGCTGGCGAT CCATGTCGAT CATGAACTCC CCATTGATTT CCATTCCAAC GGCAGGAAAC TCCATCATGA AACGAATCTT TTTGAACACG CAACGATTAC CACTGGTTCT GGTCTGGACT AG
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Protein sequence | MSMVTSNRLL PLLAGSVVLM AVLVAVKSCS PNEEQPQLLE AVPQAPKPDA DTPADTIKTL TANVSAMTSE LNALRRDNTA LKQENRDLIK DRKQIENNVL SRVQTALETK RMDAAPTETT SAIAALTARV DSLTNRFGTS STRPSSTGSD IPIGLGLDGI GTSAAESESL VWVNPLEFTP SPDGDKETLL NRFSRTSRNA LDGTRPEVQS LVAKGSDALN TALPVYTVPR NATLIGSTGM TALVGRVPIQ GQVRDPMPFK VITGKENLAA NGLRIPGVEG MIWSGTAIGD WTLSCVTGKL ESVTFVFEDG TIQTLSSDEN QLGGSSGNSD RPLGWISDAR GIPCITGERK TNAPAFLAQR IGVMALQAAG EAAAQSETTT LISDSGTATS VVSGETGKYV LGKTLGGGSD EVAQWLRERQ AQSFDAVFVP AGIELAIHVD HELPIDFHSN GRKLHHETNL FEHATITTGS GLD
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