Gene Noc_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0608 
Symbol 
ID3706840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp655151 
End bp655675 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content51% 
IMG OID637737116 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_342657 
Protein GI77164132 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00236146 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGTGC TGTCTGAGAG CTTATTCCGC ATTGAGCTAT TGCTGGAGAA GGGCGGTATT 
GTTTTGTGGC TCATTCTTAT GGCCTCTTTA TTAATGTGGG CGTTGATTGT TGAACGGTAT
TATTTTTTAC TTTTGATTTA TCCTGCGCGT TTGCAGCAAT TTCTCAAGCA ATGGCAGCAA
CGGCAAGATC GTCAGTCCTG GTATGCCCAG CGCATTCGGG AAGGAATGGT TGCCGAGATC
TCCGCTAGCC TGCACCGGTT CCTCCTGCCC ATAAAGACTT TGGCGGCGGT GCTGCCCATG
CTGGGTTTAT TAGGTACGGT GATGGGGATG ATTCAGGTTT TTGATGTAAT GACAGTCTTT
GGTACGGGTA ATGCTCGCGG GTTTGCGGGA GGTATTTCTA TTGCCTTGAT CACAACGATG
GCCGGTTTGG TGACCGCTCT GTCGGGACTT TATTTTAGCG CTAACCTGGA GCACCGGGCC
CAGCGGGCTA TTCAGCACAC TAGAGACTCG CTGCGCCGGG AATAG
 
Protein sequence
MGVLSESLFR IELLLEKGGI VLWLILMASL LMWALIVERY YFLLLIYPAR LQQFLKQWQQ 
RQDRQSWYAQ RIREGMVAEI SASLHRFLLP IKTLAAVLPM LGLLGTVMGM IQVFDVMTVF
GTGNARGFAG GISIALITTM AGLVTALSGL YFSANLEHRA QRAIQHTRDS LRRE