Gene Noc_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0604 
Symbol 
ID3706836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp651711 
End bp652364 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content52% 
IMG OID637737112 
Productthiamine-phosphate diphosphorylase 
Protein accessionYP_342653 
Protein GI77164128 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0199515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTT CCATTCGCGG CCTTTATGCC ATTGCTGACA CCCACCTATT ACCCCGTCAA 
GATTTGGGTA ATGCCGTTGC CCTAGCATTA CAGGGTGGCG CCTCTCTAAT CCAATATCGG 
GACAAAAGCC AAGAGATAAC GCGGCGCTAT AAAGAGGCCG AGTCCTTGCA GCGAATCTGC 
CACCAATATC AGGCGCCGCT GATTATTAAT GACGATGCTT TGCTTGCCGC TGAAATTGGC 
GCAGAGGGTG TTCACCTGGG ACAAGATGAT TCTTCTATTA CTTCAGCCCG AAAGATCCTG 
GGCGCCAAAG CGATTATTGG CATCTCCTGC TATAATGACT TGGCGCGGGC GATTGCGGCG 
GAACAAGCCG GCGCTGATTA TGTGGCCTTC GGTCGTTTAT TTCCATCCAT CACTAAACCA 
GAACCCATTT GGGCTTCCCT GGCGTTGCTG AGAGAAGCTC GAAAGAATTT AAACCTGCCG 
ATTGTAGCCA TTGGCGGCAT CACGCCAGAA AACGCACTGC AAGTTATCGA AGCGGGCGCC 
AGCGCGGTGG CTGTAATCGG TGGACTCTTC AAAAGCAGGG ATATCCGTGC GGCAGCGGCT 
GCCTACCGGC AACATTTCCC AAGCTGGAAT TTGCCTAAAC CCCGTCTTTT TTAA
 
Protein sequence
MSSSIRGLYA IADTHLLPRQ DLGNAVALAL QGGASLIQYR DKSQEITRRY KEAESLQRIC 
HQYQAPLIIN DDALLAAEIG AEGVHLGQDD SSITSARKIL GAKAIIGISC YNDLARAIAA 
EQAGADYVAF GRLFPSITKP EPIWASLALL REARKNLNLP IVAIGGITPE NALQVIEAGA 
SAVAVIGGLF KSRDIRAAAA AYRQHFPSWN LPKPRLF