| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0602 |
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| Symbol | |
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| ID | 3706834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 649043 |
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| End bp | 650749 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637737110 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_342651 |
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| Protein GI | 77164126 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0823902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAATT GGCGCGCCTT ATTGCTTTTT TTAGCTATTT TCATCGCCGG AAATACCCAC
GCCGAAGAAA CGTTAACACC GCAAGAAAAC ACCACAAAAA ATTCAGCTTC GCCAACGATA
ACGGCGGTTA AACCCAATCC TGTTCCAGGA GCCCAACAAC GGCAATGGAT TAAGCTAATC
GGAGAAGGCT TTAACGCAAA GTCAAAAGTC ATGTTGCGCC TTAGAGAGCG AATTTTCCCT
ATCCCCCCCG AACGAACTCG GTTCATAAGC AGCAAAATAT TGGAGATCTA TGTCAATGTT
TCCACGGGGC CCGCTACCTG GCAGGCACAA GTGAGCAACT CGGAAGGACA AAAGACTAAG
CCCTTTAGCT TTGAGGTCAA GCCGCCGGCT GCCATTGCCT CACAACCACA AGAAGTAGAG
GAACGAGGAA GAAAAGCCGA GGTAGAGGCC CTAGAAAAAA AAGCAGAAGA GACTGATAAA
AAAATAGAAC AGGTGAAAGA AACCGCTGAG GCGGCCAAGC TGGAGGCGGC GCAAACCGCC
CTCAAAAAAG CCACGGTGCA ACAGCAAGTG GAAAAAACAG CACAGGCAGC CAGGGCAGCC
CAACAGCAAC TAGAAGCCGC CAAGGCTAAA GCCCAAGCCA CGGGGGATGC AGCTGACCAA
AAAGAAGTTG AAAAATTAGC GGAAGAAGCG GAAAAACGTA AACAGGCGAC TGCCGCCGAA
GAAAGCAGGC TTGCCGCTAT CGAAGCTAAA GAGCAAGCCG CGAAAGAAAA AACGACTGCT
ACGGAAACTG AAATTGAAAA ACTTCAACAA GAGTTTGCAG AATTAAGAAA GCAGCGGGCA
GCAAAGCGGA CTTTCCTAGA GCAAGCCACA ACCGCAGCCT GGATTATTTT AGCGGGCTTT
ATTATTTGGT TTATAAAGAG ACTCGCCGTC AATAAATTTG AAAGCGTAAC AGTTAAAAGA
GAGGAAGTCC GGGAAGGCAG CGCCAGACTA AGAACCCTGG TGCTATTACT CAATTGGCTT
GGCACCATTC TAATTGTGCT CACTGTGAGC TATCTTGTCC TGGATGAATT CGGCATTAAT
ATGGCACCGA TTTTAGCCAG TGTAGGAATC GTGGGCCTCG CCCTGGGCTT TGGTGGACAA
TATCTGATTC GAGATATCAT CAACGGTATT TTTATTCTGA TAGAAGGACA ATACAGCATT
AATGACATCA TTCAGATTGA CGAATTTTCG GGGGTTGTGG AGGTGGTGAA TCTGCGCCAT
ACCCAATTAC GGGATCTGGA CGGTCGAGCT ATCTATATCC CCAACGGTGA AATTAAGAAA
GTCGTTAATT TCACCAAGGG TTATGGGCAG ATGGTGCTTG ATATCGGCGT CGCCTACAAA
GAAAATGTCG ACCATGTCAT GGAGGTGATG AAAAAAGTTG TAGAAGAGAT GCGGCAAATT
CCAATGTGCG CCAGGTTTAT TAAAGATTTT GAAATGTTTG GGGTGGAAAA ATTTGGAGAA
TCAGAAATCA TTATTCGTTG TCGTTTTAAA ACTAGAGCCG GTAAACAATG GGAAATCGCT
CGAGAATACC GGCGGCGGCT GAAAAACCGT TTCGATGAAC TGGGGATTGA GATTCCATTT
CCCCAGCGAA CATTAAATTG GAAAACGCCT TCTCAAAGCC GACAAACTGA AGAAACTGAA
CACACCAAAA GTGCTACCTA TAACTAA
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| Protein sequence | MANWRALLLF LAIFIAGNTH AEETLTPQEN TTKNSASPTI TAVKPNPVPG AQQRQWIKLI
GEGFNAKSKV MLRLRERIFP IPPERTRFIS SKILEIYVNV STGPATWQAQ VSNSEGQKTK
PFSFEVKPPA AIASQPQEVE ERGRKAEVEA LEKKAEETDK KIEQVKETAE AAKLEAAQTA
LKKATVQQQV EKTAQAARAA QQQLEAAKAK AQATGDAADQ KEVEKLAEEA EKRKQATAAE
ESRLAAIEAK EQAAKEKTTA TETEIEKLQQ EFAELRKQRA AKRTFLEQAT TAAWIILAGF
IIWFIKRLAV NKFESVTVKR EEVREGSARL RTLVLLLNWL GTILIVLTVS YLVLDEFGIN
MAPILASVGI VGLALGFGGQ YLIRDIINGI FILIEGQYSI NDIIQIDEFS GVVEVVNLRH
TQLRDLDGRA IYIPNGEIKK VVNFTKGYGQ MVLDIGVAYK ENVDHVMEVM KKVVEEMRQI
PMCARFIKDF EMFGVEKFGE SEIIIRCRFK TRAGKQWEIA REYRRRLKNR FDELGIEIPF
PQRTLNWKTP SQSRQTEETE HTKSATYN
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