Gene Noc_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0588 
Symbol 
ID3706800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp632328 
End bp633062 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content54% 
IMG OID637737096 
Productglycosyl transferase family protein 
Protein accessionYP_342637 
Protein GI77164112 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGCA ACTCAACCAA AAGCGCTGAC CAGGGGCGGT GGCACTCACG ATCGGCGTTC 
AGCATCATCG TGCCGATGTT GAATGAAATT GAGTTGCTGC CGGATCTGCT GGCGCATTTA
CAGTACTGGC AGCGACAGGG TTGCGAAGTG CTACTGGTCG ATGGTGGCAG CCAGGATGGC
TCCGCCAAAG TGGCTGAAAG CATTGGTTTC AAAGTTATTC GCTCCGCCCG TGGGCGCGCC
GTGCAAATGA ATGCCGGTGC GACACAGGCC AACGGCTCGG TTCTGGTATT TTTGCATGCG
GATACTCGCT TACCCAAAGA TGGGTTGGAG CGCATTTCCC GAGCTATTTA CAAGCGCCGC
TGGGGACGCT TTGATGTCCA CATCAGTGGC GATACGGCGA TGCTCAACAT GGTGGCCTTT
TTTATGAATG GGCGTTCCCG GTTAACGGGC ATAGCAACCG GTGATCAAGC TATTTTTGTG
GAAAGAACCT TGTTCGAACA CATACAGGGT TATCCAGAGC AACCTCTCAT GGAAGACATT
GAACTATCCA AGCGATTGCT GTGCATTGAA CGCCCTGCCT GTCTTTCAGC AAAAGTCGTT
ACATCCGGGC GTCGGTGGCT ACAACGAGGA ATCTGGCGCA CGATCGGGCT GATGTGGCGG
CTACGCTGGG CCTATTGGCG AGGTGTGCCG CCTGAACAGC TAGTCAAACG CTATGAGCAA
TCGGTGAAAC AATGA
 
Protein sequence
MTGNSTKSAD QGRWHSRSAF SIIVPMLNEI ELLPDLLAHL QYWQRQGCEV LLVDGGSQDG 
SAKVAESIGF KVIRSARGRA VQMNAGATQA NGSVLVFLHA DTRLPKDGLE RISRAIYKRR
WGRFDVHISG DTAMLNMVAF FMNGRSRLTG IATGDQAIFV ERTLFEHIQG YPEQPLMEDI
ELSKRLLCIE RPACLSAKVV TSGRRWLQRG IWRTIGLMWR LRWAYWRGVP PEQLVKRYEQ
SVKQ