Gene Noc_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0580 
Symbol 
ID3706792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp625311 
End bp625895 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content48% 
IMG OID637737088 
Producthypothetical protein 
Protein accessionYP_342629 
Protein GI77164104 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTTGC GTCACTTGCG TCAATTTACC CCGATTGCGC TTGCCCTTTC TCTGATACTT 
AACGCTAGTG CTTCAGCCCA GGAGAAAGAG GAGCCGCCTA TATTTGGGTG GCTCGAACTG
GCTAAATTTA TAAACTGGCC TGTAGTCGCC AAGGTCAAAA TGGATACCGG TGCGCTTAGC
TCCTCGCTCC ACGCCACTAA CTTAGAATAT TTTCAACGGG ATAATGCCAA ATGGGTACGC
TTCACAGTAG AAATCGAAGA TCAAAAGGAC CAGAAAGAGA AAGTTCAGGA AATATTTGAA
GAACCGGTCT ACCGTTTCGT GACAATTACC AGCTCGAACG GTGAAAGTGA TCGCCGGCCC
TCCGTGCTAA TGAAGCTTTG CCTAGGAGGT GAAATTTACG AGGAGCAATT TACTTTAAAT
GACCGCAGTG ATCTGACTTA CCCTGTCCTG CTTGGTCGGC GCACCATCGA ACACCTGGGA
CTAATCGATG TCACCCGCAT CTTCACCAGT CGCCCCCAAT GTAGCGATAA AGCGCCGGTG
CATACTATTG AAAATCGAGA ATTAGACGAA GATATTGGGA TCTAA
 
Protein sequence
MLLRHLRQFT PIALALSLIL NASASAQEKE EPPIFGWLEL AKFINWPVVA KVKMDTGALS 
SSLHATNLEY FQRDNAKWVR FTVEIEDQKD QKEKVQEIFE EPVYRFVTIT SSNGESDRRP
SVLMKLCLGG EIYEEQFTLN DRSDLTYPVL LGRRTIEHLG LIDVTRIFTS RPQCSDKAPV
HTIENRELDE DIGI