Gene Noc_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0579 
Symbol 
ID3706791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp624358 
End bp625107 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content54% 
IMG OID637737087 
Producthypothetical protein 
Protein accessionYP_342628 
Protein GI77164103 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA CGGTACATCC TCTAACCATC ATTCCTCACT GGCCCGCCCC AGCCAATGTC 
CGTGCCTATA CCACAACCCG CAGCGGTGGA GTCAGTCTCC CTCCCTATCA TTCATTTAAT
CTTGCTGAAC ACGTGGGGGA TACACCGGAA GCGGTTAAAA AAAACCGCTT TCACCTTTAC
CAGTTCCTCT CTTTGCCCTG CGAGCCAAGC TGGTTAAAGC AGGTCCATGG CGCAAGAATC
GTCTCTGCGA ATTATGGTCC GGGGCAACAA GGCGATGCCA GTATTGCCTA TGGACCCGGC
CCTGTATGCG CCATACTCAC TGCCGATTGT CTCCCACTGC TGCTCTGCGA CCAGAAGGGA
ACCCGGGTGG CGGCGGTGCA TGCAGGTTGG CGGGGGCTGG CGGCAGATAT TATTGGAGCC
ACAATTAACG CTTTGGACAT TCCTGGAGAA CATTTGCTGG CCTGGCTGGG ACCAGCCATT
GGTCCCCAAG CTTTTGAAGT TGGCCCCGAA GTGAAACAAA CCTTTTTAGA CCAGAATGAT
GACCATGCCC TGGCTTTCAA CGCTAACCGC CCAGGACACT GGTTAGCGGA CATTTACCAA
CTTGCGCGCC TCAGTCTAAC AAAGCGAGGA GTCCGATCTA TTTATGGCGG CCAATACTGC
ACCGTTGCTG ATCCGGACCG TTTCTATTCC TATCGGCGGG AGGGGATAAC AGGGCGCATG
GCAACACTCA TTTGGCTAGC GGCTGCTTAG
 
Protein sequence
MENTVHPLTI IPHWPAPANV RAYTTTRSGG VSLPPYHSFN LAEHVGDTPE AVKKNRFHLY 
QFLSLPCEPS WLKQVHGARI VSANYGPGQQ GDASIAYGPG PVCAILTADC LPLLLCDQKG
TRVAAVHAGW RGLAADIIGA TINALDIPGE HLLAWLGPAI GPQAFEVGPE VKQTFLDQND
DHALAFNANR PGHWLADIYQ LARLSLTKRG VRSIYGGQYC TVADPDRFYS YRREGITGRM
ATLIWLAAA