Gene Noc_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0564 
Symbol 
ID3706776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp612237 
End bp613751 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content41% 
IMG OID637737073 
Producthypothetical protein 
Protein accessionYP_342614 
Protein GI77164089 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.755546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGCCATT TCCTTTTTGA GGAGAAAACA CAAAAGTTCA ATGTAATAGA CGGCCAGCAA 
CGCTTAACAA CCATTGTCAT TTTCTTATCG GTCCTGTTTG CCCAGCTGAA ATCAATAAGA
GATTTATCGG AGGAAGAAGA AATATGCTAT GAAGATATGG TGAAGAGGCG AAGCGCAATA
CGCTTTTGGA CTGTTGACTA CGATAATCAA TTGTTCATTG ACTATGTAAT AGACCAAAGC
AAGTCTGAAC ATAATGGCCT TGAAACGGAA TCGTCACGAC GAATCGTCAG CGCATTCGAC
TTTTTCAAAA ATCATCTTTC TGATAAACCA GAAGAGTATC TAACAAAAAT GCTGTTGATT
GTTGCTGGGG CAGCTTGTAC CACGCACCCG GTTCAAAATG AATCGGAGGC GATACAGATG
TTTATCTTTC AAAATAGTCG CGGAAAACGA CCGTCAAATC TTGAAATAGT GAAAGCCCAA
TTCATGCATC ATGCTCACCT GCATGGGGGC GCCAAAGATG AAGTTGATTC GTTAATTGGT
GAAATCAAAG GGCGTTTTGA AAAAATCTAC AAATCAATTT CTTCAATCGA ATACAGAATT
AATGAAGATG ATGTTTTGCT ATACACCTTG CGGGTTCACT TTAACTCGCT CTGGGAAACA
AACTCTTTAG ACAAAATCAA CAAGATGTTG GCCGATGGAA ATCCACTTGA TTTCATCAAG
TCGTTCTCGA GGTCGCTCTC GACAAGTTTT GAACATCTGT CACAGTTTTT TGGCAAGCAT
GAGAGAGAAA ACTTTGCGAT TCATTCTCTA ATATCACTAG GCGGGATAGC TGTTGCGCTT
CCATTTGTCA TTAAGGCATA CAGATATGGC TTGTCTCTTG ATCAAATTGG CAAACTTTGC
TGGTCTTTGG AATCTTTAGT GCTTCGGCAT CGTTTAATCG GGACAAGGGC AAATATTATT
TCAAGAATCA ACGATGTATT CGAGAAATTC ACCGAAAGCA ACAAAGACAT TTCCCCAGTA
ATTGACCATA TTGAATGGAT GAAGACGACA GATGATTGGT GGTGGGCCTA CTGGAACAAT
GACAGGTTGA AAGAATCCAT CCAAGGAGGA ATCAATCATT CAACCGCAAA ATACCTTCTC
TGGAAATATG AGGTTCATTT AGAGCAGCAG GGTAAAGCCG GTTATTCACC AATCCGGTTT
GATAATATCA TCAGTCCTGA GCTGGAACAT ATCGCCCCCA CGACGGAACC TGAAAGTAAG
CCCCATGGCT ATGATGATTA TGACGATGAG TTCAGGAACC AATATCTAAA CACTCTTGGC
AACTACCTGT TGTTATCAAA GTCGCATAAT TGCGCGGTTG GCAATATTCT GCTTTCCCAA
AAATTAGCCA CATATACCCA TAATGAACAG CAGAGAGAGG TGAGGAGCCT TGTTCCTAAA
AACGGAATAT GGAGCAAAGA AATAATACAA CAACGGAAAA ATAAGATCAT TGGTGTAATC
ATGATCATTT GCTAA
 
Protein sequence
MGHFLFEEKT QKFNVIDGQQ RLTTIVIFLS VLFAQLKSIR DLSEEEEICY EDMVKRRSAI 
RFWTVDYDNQ LFIDYVIDQS KSEHNGLETE SSRRIVSAFD FFKNHLSDKP EEYLTKMLLI
VAGAACTTHP VQNESEAIQM FIFQNSRGKR PSNLEIVKAQ FMHHAHLHGG AKDEVDSLIG
EIKGRFEKIY KSISSIEYRI NEDDVLLYTL RVHFNSLWET NSLDKINKML ADGNPLDFIK
SFSRSLSTSF EHLSQFFGKH ERENFAIHSL ISLGGIAVAL PFVIKAYRYG LSLDQIGKLC
WSLESLVLRH RLIGTRANII SRINDVFEKF TESNKDISPV IDHIEWMKTT DDWWWAYWNN
DRLKESIQGG INHSTAKYLL WKYEVHLEQQ GKAGYSPIRF DNIISPELEH IAPTTEPESK
PHGYDDYDDE FRNQYLNTLG NYLLLSKSHN CAVGNILLSQ KLATYTHNEQ QREVRSLVPK
NGIWSKEIIQ QRKNKIIGVI MIIC