| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0558 |
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| Symbol | |
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| ID | 3706770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 603667 |
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| End bp | 604521 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637737067 |
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| Product | spermidine synthase |
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| Protein accession | YP_342608 |
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| Protein GI | 77164083 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.587029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTAG ATCCGAAGGG ATGGTTCACT GAGGTTTGCA AGGAGGGCGG CCTCGCTTTT
TCTCTTGCCA TCAGGGAAAA ACTTCATGCG GAGACCACTC CCTATCAGTA TATCGAAATT
TATCAGACCG AGACTTTTGG CCGGTTGATG GTCATCGACG GCTTTATTAT GCTATCTGGA
AGGGATAATT TTTTCTATCA TGAAATGATG GCTCACCCGG TGTTGTTTAC CCACCCTCAT
CCACAACGGG TACTCATCAT CGGGGGGGGA GATTGCGGGA CCTTGCGGGA AGTGCTTAAG
CATGACGTAG TTGAGAAAGT CCAGCAGGTG GAGATAGATG AACGGGTTAC CCGGTTGGCG
GAAAAATATT TTCCAGAACT GTGCCAAAGT AACGATGATC CCCGGGCCCA TTTCCACTTC
GGTGATGGAC TGCGCTTTGT GGCCGAAGCG CCCGCCAACA GCGTCGACGT TATTATCATT
GATAGTACCG ATCCGATCGG TTCTGCGGAG GGGCTTTTTC AGGCTTCATT TTATGCTGAT
TGTCAACGGT TATTGGGGGA GAAGGGCATT CTGGTGCATC AAAGTGAATC TCCCCTAATC
CATTTGGACC TCCTCAACAA GATGCGGGCG GAAATGAAGA AGGGGGGCTT TCCCCAGGTA
CGGACCTTGA CTTACCCCCA GTGCGTTTAT CCTTCTGGCT GGTGGAGCGC AACTTTGGCG
GGGCATACTT TGTCCTGCTT CCGGGAGCGG GACGCCACGG CCAAAATCTT TCCAACCCGT
TATTATAATG TGGATATCCA CCGGGCTTCC CTGGCTGTTC CAGAATTTCT GCGCCAGACA
GAAGAGTCAT CATAG
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| Protein sequence | MQLDPKGWFT EVCKEGGLAF SLAIREKLHA ETTPYQYIEI YQTETFGRLM VIDGFIMLSG
RDNFFYHEMM AHPVLFTHPH PQRVLIIGGG DCGTLREVLK HDVVEKVQQV EIDERVTRLA
EKYFPELCQS NDDPRAHFHF GDGLRFVAEA PANSVDVIII DSTDPIGSAE GLFQASFYAD
CQRLLGEKGI LVHQSESPLI HLDLLNKMRA EMKKGGFPQV RTLTYPQCVY PSGWWSATLA
GHTLSCFRER DATAKIFPTR YYNVDIHRAS LAVPEFLRQT EESS
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