Gene Noc_0553 details

Gene Information

• Locus tag: Noc_0553
• ID: 3706746
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 596787
• End bp: 597389
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637737062
• Product: GTP-binding protein
• Protein accession: YP_342603
• Protein GI: 77164078
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.332717
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCCC TCTATCGTAA GGCCCATTAT CAAGGGAGCG CTTATACTTT ATCCCAATTA 
CCTCCAGATG AAGGGATGGA GGTGGCGTTT GCGGGGCGCT CTAACGTAGG AAAATCAAGC 
GCCATTAATG CTATTACCGG TATCGGAGGA TTAGCGCGAA CTAGCAAGAC GCCGGGGCGC 
ACCCAGATGA TCAACTTTTT CCAGCTGGAT GCTCGCCGCT ATTTAGTAGA CCTCCCCGGT 
TATGGGTATG CCAAGGTGCC AGAGGCGGTA AAACGGCAGT GGCAGCAGAC TTTAAGCGCG 
TACTTGGAAC AGCGCCGCGC CTTATGCGGG ATCGTGCTGG TTGTGGATAT TCGGCGTCTC 
TACCAGCCCT TCGATCTCCA GATGTTGGAA TGGTGCCGCT CCAGGGGTTT GCCAGTCCGC 
ATATTGTTGA CTAAGAGTGA TAAGTTAAAG AGGGGGGCTG CAAATCAAGC TCTCCAAAAA 
GCAACCACGC ACTTGCAGGA AGTTTTTCCC ATGGCGCGGG TGCAACTGTT TTCAGCTGTC 
AATCATACAG GGATTGAGGC TATACAAGCC CAGCTTGACG AATGGCTTGG GATTGGGGGA 
TAA 

 

Protein sequence

MNSLYRKAHY QGSAYTLSQL PPDEGMEVAF AGRSNVGKSS AINAITGIGG LARTSKTPGR 
TQMINFFQLD ARRYLVDLPG YGYAKVPEAV KRQWQQTLSA YLEQRRALCG IVLVVDIRRL 
YQPFDLQMLE WCRSRGLPVR ILLTKSDKLK RGAANQALQK ATTHLQEVFP MARVQLFSAV 
NHTGIEAIQA QLDEWLGIGG