Gene Noc_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0548 
Symbol 
ID3706740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp590508 
End bp591665 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content59% 
IMG OID637737056 
Producthypothetical protein 
Protein accessionYP_342598 
Protein GI77164073 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGCCGGA AGAAGAAATT CTGGATCAAT GGTCCCAAAG CGGTAGCCGA ATCCGACTGG 
AAATCCCTCA TTGGCGATGA TCCCACCCTC ATCATGCTAG ATGAACTGCC CCCTTATCTG
CATATGGCCC ACACTGTGCC GGTGGGCGGC GGCACCCTGG CGGATGTGTT GCTGCGGGCC
AAAACCAATC CCGCTTGGCC CTGGATGCCG GGCCTCAAGG GACTCGATAC CCTTAAATCC
CTGGCCCTGG AGCAAGGCCG CTGGCGGGAA GGGACGGACG GCTACCTGGA GAAAGGCCCC
TTCCCCAAGG AAAAAACCAC AGTCAACATC ACGGTACAGG GCACGGATCG AGACACAGGC
GAGGCCACTT TGACCCTCAC ACCCCGCCAT GCGGGATCTA ATCCCCAGGT TCACTACAGC
CCCCAGGCCC AGATCTCCAT GGAGGACCCG GTGGTCTCTG ATTTGGATAA CTTCCGCACC
CAGGAAGCCA CCCTTTACTT TCTGGCGGTG GACCCCGCAG GCGAGCACTC AACCGGCGAG
CCCGTACGCT GGAACAACCG GCTGGTGATT CGGCACCAAG TTCGAACCAC CGCCGAAGGC
TGCAAGGTAG AACTGCGAGT GGTTCCCACG GCCGCCATCC TCCGCTTTAC CCTCAATGGG
GCCAACCCCA AGAAAGGCCA GCTTTACGAA GGGCTTTTCC CGGCGCCGCC GGAAGGGGCG
ATATTGCAAG TTTATGCCCG CGCCGGTGAG GCCGAAGCCC AGGAAACTAT TAAACTTTCG
GCGCTAGGTA ATAACCAGCC GCAGATTAAT GATGGGCAGC CTGCCTATCT TCGCATTCCG
CGGCTCACCA TCGATACCAC TGAAAAGACT TTTAACCTCA TCCAAGCTTT CCGGGAGGAT
GACACTACCC AGTTCAAGGG GGTCCAGGTT ATTATCGGCG AGAACGAGGA AGCCGTGATC
CTAAAATTCA ACGCCCGCCC GGTGACCGCG GCGGTCATCG AACAGTCCGT CCGCGCCCTG
CGCCAGGCCA TTGGCGATGA CCAGGCATCG GTGCAGATCA CCATCCGGGA AGGAGGCCAC
TTCCGCAACG GTTACGAGCT CAAGCGCTTT GCCGAGCTTT GCCAATTGAA GCTAAGCCCG
GAGGTGGTGC TCCAATGA
 
Protein sequence
MCRKKKFWIN GPKAVAESDW KSLIGDDPTL IMLDELPPYL HMAHTVPVGG GTLADVLLRA 
KTNPAWPWMP GLKGLDTLKS LALEQGRWRE GTDGYLEKGP FPKEKTTVNI TVQGTDRDTG
EATLTLTPRH AGSNPQVHYS PQAQISMEDP VVSDLDNFRT QEATLYFLAV DPAGEHSTGE
PVRWNNRLVI RHQVRTTAEG CKVELRVVPT AAILRFTLNG ANPKKGQLYE GLFPAPPEGA
ILQVYARAGE AEAQETIKLS ALGNNQPQIN DGQPAYLRIP RLTIDTTEKT FNLIQAFRED
DTTQFKGVQV IIGENEEAVI LKFNARPVTA AVIEQSVRAL RQAIGDDQAS VQITIREGGH
FRNGYELKRF AELCQLKLSP EVVLQ