| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0546 |
|---|
| Symbol | |
|---|
| ID | 3706738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 586862 |
|---|
| End bp | 589873 |
|---|
| Gene Length | 3012 bp |
|---|
| Protein Length | 1003 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637737054 |
|---|
| Product | DNA methylase containing a Zn-ribbon |
|---|
| Protein accession | YP_342596 |
|---|
| Protein GI | 77164071 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1743] Adenine-specific DNA methylase containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGCCC CCCAACAGGA GCAGACGCTA TGCCTTGAGG CACCGCCGCT CAAGAATACC
CCCGCCCTCC TGGAGCGGGT CTTCCCGGCC CAGAAGATTT CCGCCGAAGC CCAGAAGGAA
AGAAAGGCCG GTTCGGGGAA AACCCTCACC GCCCTGGGCT CCTACTGGAA AGGCCGCAAG
CCCCTCATCC TGGTGCGGGC TCTTATTCTG GGTTCGTTAC TTCCCGCCAC GGATGATCCA
GAAACGGATT TAGCGATCTT CGAGCAATTG ATGGCCCTGG ATGAGGCGTC CTTCGGGCGG
CGGGAACCAA AACTAAGCGC GGCCCAGGTG GCGGCAAGAA TCACGCTGCC CCGTCCCTGG
GATTATTTCG ATTATAGTTT CAAGGACGCG ACGGTTGAGC CTACGAAAAT AGAGGAGCTG
ACCTTTCCCC TCCGGGCCGG GGACATCCCC GGGCTGTCCC TGCGCTGGAA GCGGGCTATT
CCCCTGGCGG ACAAGCAAAC ACTGCTGGCG GCGGCCCTAA AGGAGCTGCC CTACCCGGAC
AAAGTGGCCC TTTGCAAGCG ACCGGAGGAG TGCGATCCGG CAACCCTCTA CGGCCCCATC
TGGGACTCCG TCAATCAACA TCTGGGGCGC TTTGGCGTCC AGGCCCATAG CCACGAAGAG
CTGGTAGCCC AGTTGGGTAT GCTTCGCTTT GGGCACCGGC CCCGGGTGGG AGACACCTTC
TGCGGCAGCG GTTCCATTCC CTTCGAGGCC GCCCGCCTGG GCTGCGAGGT GTATGCCTCG
GATCTTAACC CCATTGCCTG CATGCTCACC TGGGGAGCGC TCAATATTAT TGGCGCTTCC
CCTGAGCGGC GAGATGAGAT CGCCCAGGCC CAGCAAGCGG TGGCCGCAGC GGTGAACCAG
GAAATCACCG CCCTCGGCAT TGAGCACAAC AGCCAAGGCG ATCGAGCGAA AGCCTATTTG
TATTGTCTGG AGACTCGCTG CCCGGAAACC GGCTGGCAGG TGCCTCTAGC GCCCAGTTGG
GTGATTTCTA AAACCCGCCA GGTTTATGCC AAGCTGATTC CAAATCCGCG GGAAAAACGC
TTTGAAATTG ACATTGTCAG CGGCGCTTCC CCAGAGGAGA TGGCAGCCGC TGAGCAAGGC
ACGGTCCAGC AGGGGCAGAT GGTGTATACG CTGGAAGGGA AAACCTACCG CACCTCCATC
AAAACCCTGC GGGGCGACTA TCGAGACGCC CAGGGCGTTA ACCGCAACCG CCTGCGGCAG
TGGGAGAAGC ACGATTTCAG GCCCCAGCCG GAGGATGTCT TTCAGGAGCG CCTTTACTCC
ATTCAGTGGA TCACCCAGGA AACGCTGGGG AAATCCCGGC AGCAGACCTA TTTCGCCCCG
GTCACCGAAG AAGATCGGGC GCGGGAGCGA CAAGTGGAGC AGATCGTGGC GGAAAATCTG
GCCTCCTGGC AAGAGCAAGG ACTCGTGCCC GATATGGCCA TTGAACCGGG TAAAGAGACC
ACGAGGCTTC AACGGGAGCG CGGCTGGCGG TATTGGCATC AATTGTTTAA TGCACGGCAG
CTACTTATTT CTTCGCTTTT CTGCAAGCAT CGACACCCCG TATCTGCGAT TTGTCTTTTA
AAGGCGGCTG ACTGGAATAA TCGGCTATGC CGGTGGGAGC CTTATTGGGC TAAGTCACAA
CAAGTCTTTT ACAATCAAGC ATTAAATACC TTTTATAATT ATGGGACTCG GGCGTATGAC
ATGCACATGC AGGCGTACGA TTTGCCTATG AGGCGATCTC AAACATTAGA CGTATCCAAT
TATGTTGAGA TGTTGGATTG CCGCTCAATT ACTGCGGTGG CAGATCTGTG GATCACCGAT
CCGCCCTACG GGGATGCGGT TCACTACCAC GAAATCACTG AGTTCTTTAT TGCCTGGCTG
CGGAAAAACC CGCCCGCCCC CTTCAATGAA TGGATCTGGG ACTCCCGCCG GGCGCTGGCC
ATTCAAGGCG CTAGCGACAA GTTCCGCCGC GATATGGTGG AAGCTTACCA AGCCATGACC
GAACACATGC CGGATAACGG CCGTCAATGC GTCATGTTTA CCCATCAGGA CAGCCGGGTG
TGGTCCGATA TGGCCGCTAT CTTCTGGGCG GCGGGTCTCC AGGTCATCAA CGCCTGGTAC
ATTGCCACCG AAACCAGCTC CGAGTTGAAA AAGGGCGGTT ATGTCCAGGG CACCGTGATT
CTGCTCCTGG GGAAACGGCC GCCCGGCCAG CGGGCGGGCT TTACCCCCCG TCTTCTGCCC
CAGGTGCGCA AGGAAGTCAA CGCCCAAATC CAGGACATGA TGCATCTTAA CGCGCGGACT
CAGGAACAGA TGGGGGCGCC CGTATTCACC GACTCCGATC TCCAGATGGC GGGCTACGCG
GCGGCCCTGA AGGTCCTCAC CGGCTACACG GAAATCAACG GCGAGGAAGT CACCCGCCTG
GCGCTGCGTC CCCGGCGGAA GGGGGAGAAA ACGGTGGTGA GTGAGATGGT TCAGCAAGCG
GCGGCAACCG CCAACAGCCT CCTCGTCCCT GAGGGCCTGC CCAAAGCGAC TTGGGAGGTG
ATTAGTGGCA TCCAGCGCTT CTACCTGCGG ATGGTGGCCC TGGAAACCAC CGGAGCCAGC
AAGCTGGATA ATTATCAAAA CTTCGCCAAA ACCTTCCGGG TGGACAACTA CCAAGCGGTG
ATGGCAAGCC TAAAACCCAA CAGAGCCCGG CTGAAAGGAG CCCAGGATTT CAAGCCCCGG
GAGCTGGCCG GAACCGAAAT CGGCGAGACT CTCCTGGGGC AGGTGCTGGT GGCGCTCCAG
GAACTTTTGG GGGAGAAGGA ACCACCGATC GTCATGGACA ATCTCCGGGA GGCCCTGCCG
GATTATTTTC AGCAACGCCC CCACCTCCAG GCCATGGCGC AATTTCTCGG TGACCAGCTC
GCCCAGCGGC GTCCCCAGGA AGCACGAGCC GCCGAGATCA TCGCCAGTCG GGTGCGCAAC
GAGCGCCTGT GA
|
|---|
| Protein sequence | MLAPQQEQTL CLEAPPLKNT PALLERVFPA QKISAEAQKE RKAGSGKTLT ALGSYWKGRK
PLILVRALIL GSLLPATDDP ETDLAIFEQL MALDEASFGR REPKLSAAQV AARITLPRPW
DYFDYSFKDA TVEPTKIEEL TFPLRAGDIP GLSLRWKRAI PLADKQTLLA AALKELPYPD
KVALCKRPEE CDPATLYGPI WDSVNQHLGR FGVQAHSHEE LVAQLGMLRF GHRPRVGDTF
CGSGSIPFEA ARLGCEVYAS DLNPIACMLT WGALNIIGAS PERRDEIAQA QQAVAAAVNQ
EITALGIEHN SQGDRAKAYL YCLETRCPET GWQVPLAPSW VISKTRQVYA KLIPNPREKR
FEIDIVSGAS PEEMAAAEQG TVQQGQMVYT LEGKTYRTSI KTLRGDYRDA QGVNRNRLRQ
WEKHDFRPQP EDVFQERLYS IQWITQETLG KSRQQTYFAP VTEEDRARER QVEQIVAENL
ASWQEQGLVP DMAIEPGKET TRLQRERGWR YWHQLFNARQ LLISSLFCKH RHPVSAICLL
KAADWNNRLC RWEPYWAKSQ QVFYNQALNT FYNYGTRAYD MHMQAYDLPM RRSQTLDVSN
YVEMLDCRSI TAVADLWITD PPYGDAVHYH EITEFFIAWL RKNPPAPFNE WIWDSRRALA
IQGASDKFRR DMVEAYQAMT EHMPDNGRQC VMFTHQDSRV WSDMAAIFWA AGLQVINAWY
IATETSSELK KGGYVQGTVI LLLGKRPPGQ RAGFTPRLLP QVRKEVNAQI QDMMHLNART
QEQMGAPVFT DSDLQMAGYA AALKVLTGYT EINGEEVTRL ALRPRRKGEK TVVSEMVQQA
AATANSLLVP EGLPKATWEV ISGIQRFYLR MVALETTGAS KLDNYQNFAK TFRVDNYQAV
MASLKPNRAR LKGAQDFKPR ELAGTEIGET LLGQVLVALQ ELLGEKEPPI VMDNLREALP
DYFQQRPHLQ AMAQFLGDQL AQRRPQEARA AEIIASRVRN ERL
|
|---|
| |