| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0537 |
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| Symbol | |
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| ID | 3706729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 575344 |
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| End bp | 576315 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637737045 |
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| Product | sigma-54 specific transcriptional regulator, Fis-type |
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| Protein accession | YP_342587 |
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| Protein GI | 77164062 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGGGT TTGATTCACT GATTGGTAAA GCGCCGGCTT TCGAGGCCCT TTTGCGCAGT
GCGCGCATGG TGGCGGCCAC AGAGGTGACC GCACTCATTA TAGGAGAGAC GGGTACAGGT
AAAGAGCTAT TGGCACAGGC CATTCATGCC GAGAGCCAGC GGGCAAACAA AGCATTTGCA
GCCATTAACT GTGCGGCACT GCCGGAAGGG CTAGCCGAAT CGGAACTTTT TGGCCATCGC
CGCGGCGCTT TCTCTGGCGC CGTCCATGAT CATTTGGGAC GTTTCCGGGC TGCTGAAGGG
GGCACTGTAT TCCTGGATGA AGTCAACGAG CTCTCCCCCG CGGTTCAGGC CAAGCTGCTC
CGCTTCCTGG AATCTGGCGA ATGCCAGGCC ATTGGCGATA CGCGGGTCCA GCACTGCGAT
GTGCGGGTTA TCGCCGCCAC CAATTGCAAT CTAAACCAAC GAATCCAGGA AGGACGGTTT
CGCCAGGATC TCTACTATCG TCTCCATGTG GTGCCCCTGG AAATACCGCC CTTGCGGGCA
CGGGAAGGAG ATATCCATAA GCTTTTAAAG CACTTTTGCG CCGTCTTTGC CCAGCAACAC
CACGGCCTTA CGCCCGCGGG CTTTAATGCC GCTGCCTTAC GGGCTCTCAA CCTCTATTCC
TGGCCCGGCA ATGTGCGGGA ATTGCGTAAT TTTTGCGAGC GCATGATGGT GCTGTTACCT
GGCCAAATCA TTACCCCCCA GAATCTGCCC TTTAACATCC GCGGCGACTT AAACCTGCCG
CCAGAAAAGG GGGAAAAACC ACTGATCACC TTGCCAGAAA GCGGTCTAGA ACTCGATCGG
GTAGAGATGG AGCTCATTCA CCAAGCCATC GCCAAAACTA AGGGTAATCG CGCTAAAGCC
GCGCGGCTGT TGGGTATTAG CCGCGATACG CTCTGTTACC GGCTGCAGAA ATACACCCTT
CAAACCAATT AA
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| Protein sequence | MDGFDSLIGK APAFEALLRS ARMVAATEVT ALIIGETGTG KELLAQAIHA ESQRANKAFA
AINCAALPEG LAESELFGHR RGAFSGAVHD HLGRFRAAEG GTVFLDEVNE LSPAVQAKLL
RFLESGECQA IGDTRVQHCD VRVIAATNCN LNQRIQEGRF RQDLYYRLHV VPLEIPPLRA
REGDIHKLLK HFCAVFAQQH HGLTPAGFNA AALRALNLYS WPGNVRELRN FCERMMVLLP
GQIITPQNLP FNIRGDLNLP PEKGEKPLIT LPESGLELDR VEMELIHQAI AKTKGNRAKA
ARLLGISRDT LCYRLQKYTL QTN
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