| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0536 |
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| Symbol | |
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| ID | 3706728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 574026 |
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| End bp | 575231 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637737044 |
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| Product | pheromone shutdown protein |
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| Protein accession | YP_342586 |
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| Protein GI | 77164061 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.91172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGCA CCGAACAGCA ACAGCCTCTG AGTATCATTA AATTCGCTGA TCGTCAGATT
ACCCTTCTGG GCACCGCCCA TGTCTCGCGA GCTAGTGCCG AGCACGTCAA GGCACTGCTG
GCAACGGGGG ACTACGATGC AGTGGCGGTT GAACTCTGCC CGAGCCGTTA CCAGGCCCTC
ATCAACCCTA ATGCCCTCTC CCGCATGGAT CTGCTCGAAG TACTCCGCAA AGGCAAGGCT
GCCATGGTGA CAGCCAGTCT GGCCTTGGGC GCTTATCAGC AACGGATAGC CGAGCAGTTT
GGTATCGAAC CCGGCGCGGA GATGCGCGCG GCCGTCGATT CAGCCCATAG TGCTAAACTT
CCCGTATTGT TGATCGACCG AGAAGTCGGC ACCACCCTCA AGCGCATCTA CCGCAATGTT
CCTTGGTGGC AACGCTTTAA TTTGATCGGC GGTCTGTTTG CCAGCCTAAT ATCCCGGGAT
ACAGTCAGCG AAGAAGAAGT AGAACGCCTT AAGGAGGGAG ACGTCCTGGA AACGACCTTC
TCCCAGTTTG CAATGGAAGC GGAAAATCTC TACTTACCTC TCATCGACGA GCGGGACCGC
TACATGGCAG CCCGCCTCCG GGAAGAAATC AATCAGAATG AATACCGTCA TCTCTTAGGG
GTTATCGGGG CGGGACATCT CCGGGGTGTG ACCCGTTACC TAGAGCAAGA CGACGCTACA
CCCGCGAAAA AAACTATCAC CGAACTGGAT CAGATCCCCC CCCCGAGCCG TTGGCCTAAA
ATTATCCCCT GGTTGATCGT GGTTCTGGTG TTGGTTGGCT TCATCTTTGG TTTTTACCGT
AGTCCCGAAC TGGGCTGGCA GTTGATTATA GACTGGATTT TAATCAACGG TGGCCTGGCT
GCCTTGGGAG CCCTCATCGC TGGCGCTCAC CCTCTAACCA TCGTAGGCGC ATTCGCCGCC
GCGCCTTTGA CTTCTCTAAA CCCCACCATC GGGGCAGGTA TGGTCACCGC CGCGATTGAA
ACATTTCTCC GCCGGCCTAC CGTGGGAGAT TTCAGCCGCC TCCGGCAGGA AACCGTCCAT
ATCAAAGGTT GGTGGCGCAA CCGCGTTACT CGGATTCTGC TGGTATTTTT ACTCAGCACC
CTCGGCAGCG CCGTAGGGAC TTATGTGGCC GGTTTCAAAA TCATCGATCG CTTGGCGGGA
GCATAA
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| Protein sequence | MNSTEQQQPL SIIKFADRQI TLLGTAHVSR ASAEHVKALL ATGDYDAVAV ELCPSRYQAL
INPNALSRMD LLEVLRKGKA AMVTASLALG AYQQRIAEQF GIEPGAEMRA AVDSAHSAKL
PVLLIDREVG TTLKRIYRNV PWWQRFNLIG GLFASLISRD TVSEEEVERL KEGDVLETTF
SQFAMEAENL YLPLIDERDR YMAARLREEI NQNEYRHLLG VIGAGHLRGV TRYLEQDDAT
PAKKTITELD QIPPPSRWPK IIPWLIVVLV LVGFIFGFYR SPELGWQLII DWILINGGLA
ALGALIAGAH PLTIVGAFAA APLTSLNPTI GAGMVTAAIE TFLRRPTVGD FSRLRQETVH
IKGWWRNRVT RILLVFLLST LGSAVGTYVA GFKIIDRLAG A
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