Gene Noc_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0531 
Symbol 
ID3706723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp570371 
End bp570940 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content47% 
IMG OID637737039 
ProductNnrU-like protein 
Protein accessionYP_342581 
Protein GI77164056 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAAT TCCTGCTAGG TCTCGCGTTA TTCTTCGGCA TGCATTCTAT ATCCATCGTA 
GCCTTGCCGC TACGTGATCA ATTGGCGGCA AAAAGCGAAA TCGGATGGAA AATACTGTAT 
GGCAGTGTCT CTCTCATTGG GATTATTCTC ATATCAAGGG GTTACGTGGA CCTAAGACAG 
GCACCCACTT TACTTTACGT ATCACCTATT TGGTTGCATC ATGTAGTTAC CATTCTTTTG 
CTGCCAACAT TCATTCTTTT TCTTGCGCCA TACTTTCCTG GGCGAATTAA TAACACTGTA 
AAACATCCGC AGCTTGTCGC TGTGATGATT TGGGCCGTGG CGCACTTATT GGTAAACGGC 
ACGTTAGCCG ACCTATTGTT GTTCGGGTCG TTCTTGCTGT GGGCCATCGT AGATCGTATC 
TCGATGATGA ATCGAGCTAC CCGCTCAGTA CCCAGTGTGC CTCAATCGAA AGCAAACGAC 
ATTATCGTGG TTGTGGTTGG CTTGGCTGTA TATGCGGCAA TCGTTTTCTG GCTTCATGAA 
ACGCTGCTAG GCGTGAAGCC GCTCATCTAG
 
Protein sequence
MPQFLLGLAL FFGMHSISIV ALPLRDQLAA KSEIGWKILY GSVSLIGIIL ISRGYVDLRQ 
APTLLYVSPI WLHHVVTILL LPTFILFLAP YFPGRINNTV KHPQLVAVMI WAVAHLLVNG 
TLADLLLFGS FLLWAIVDRI SMMNRATRSV PSVPQSKAND IIVVVVGLAV YAAIVFWLHE 
TLLGVKPLI