Gene Noc_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0525 
Symbol 
ID3706717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp566982 
End bp567455 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content41% 
IMG OID637737035 
Producthypothetical protein 
Protein accessionYP_342577 
Protein GI77164052 
COG category[R] General function prediction only 
COG ID[COG2402] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTGG ACACTTCTGG CCTTTACTGT TTACTTCACA AAGCAGAATT TTTTCATAAG 
CAAGCGTGTG AATTTTACTA CTCTGCTCAG AGGCGAGTGA CAAATAATTA TGTTTTAGAC
GAGTTTATTG CACTGGCTAG TGTGCGCCGA CTCCCTCGGG AAAAATCTTT AGCGTTCGTC
ACCGATTTAT TAAACAATCC TGATATTCAG GTGATTTGGA TAGATGAATC ACTAAATAAC
GAAGCGTTAA CTTTGCTGCA TGCACGAAAA GATAAAGGTT ATTCTTTACG TGATGCCGTC
AGTTTTATAA TTATGCGCCA AAAAAACATT GATGAAGCAT TGACGACAGA CATCACTTTG
AACAGGAAGG TTTTCGGCGG CTTCTTATTT AGCGTAATAG TAGCGAAAGG GTACAGCCTA
ACAGGGCGCT GTAGAGAACA TTTGACAAAG TGCGCCAACC TGCGTTCCGC GTAG
 
Protein sequence
MLLDTSGLYC LLHKAEFFHK QACEFYYSAQ RRVTNNYVLD EFIALASVRR LPREKSLAFV 
TDLLNNPDIQ VIWIDESLNN EALTLLHARK DKGYSLRDAV SFIIMRQKNI DEALTTDITL
NRKVFGGFLF SVIVAKGYSL TGRCREHLTK CANLRSA