Gene Noc_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0521 
Symbol 
ID3706713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp562994 
End bp564808 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content52% 
IMG OID637737031 
ProductSodium/hydrogen exchanger 
Protein accessionYP_342573 
Protein GI77164048 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCTG ATCTAATCCT CATTTTTTCG TTTATTGTCG TGCTTGGGGT TAGCATCCAG 
TGGCTAGCAT GGCGCTTTCA AGTCCCGGCT ATTGTGCTGC TGTTAATGGC TGGTTTCGCG
CTTGGACCGG TCTTAGGCTG GCTCGATCCG GAGCAAACTT TCGGCCATAT CCTCCCTCCT
TTAATAGCTC TCTCCGTGGC CATCATTTTA TTCGAAGGCG GACTTAACCT TCAGTGGCAT
GAATACAAAG AAGCTGGCGT CGATGTAAGG CGTTTAGTCA GCTTGGGATT ATTTTTAACC
TGGACCCTCA ATACAGCAGC AGCGCACTTT ATCGCGGGCC TCTCTTGGCC AATAGCTACC
CTCTTCGGCG CCATCAGTGT AGTCACGGGT CCTACAGTGC TTATGCCGCT GTTGAAATTT
GCCCGCCTTC AGCGCCGTAC GGCGGCGCTG CTTAAATGGG AGGGAATTAT TAATGATCCA
CTAGGCGCCT TGCTTGCCAT TTTAGTCTTC CAGTATTGGG CCGTGTGGTA CTGGGTAATG
GAGTCCCCTG AGCACGGGAT ACTTGCGGCG CTAGGCAACC TTGGCCTAGG CTTGCTCGCT
GCTACCAGCG CAGGTATCGG CTTTGGCTAC TTGTTAAGTT GGGCCTTTCA CCGGGGGCAT
GTCCCGGAAT TCCTGAAATC TCCGGTGATG CTTGGCGCCG TACTCTTGCT CTATGTCGCC
ATCAATGCCG TCCAAGAAGA AGCGGGGCTG CTAGCCGTTA CCGTGGCAGG CGTCGTCGTC
GCCAACCAAC GGCTGCGTAA CATTGAAGAA CTGCGCCGTT TCAAGGAACA TATCACCCTT
ATCCTTGTTT CAACGCTCTT TATCGTGTTG AGCGCCAACA TCGAGCTTGA AACGCTCGCC
AGACTAGATT GGCACAGCCT TGCCTTGCTG GGCATCGCTA TCTTTTTCGT GCGGCCTCTT
TCCGTCTATC TTGCCACTTT AGGAACGGGG ATAAAGTGGC GGGAAAGATT GCTCATCGCC
TGGATTGCTC CCCGAGGCAT TGTCGCCGCT TCAATGGCGG GTTTACTGGC CTTCCCTCTT
ATCCAGCAAG GTTTTAAAGG CGCCGATCAA CTCCTGCCGT TAGTCTTTGC GCTGATCGCC
GCTACCGTCA TTCTGCACGG TCTCACCATG GCGGGGCTAG GACGTCTTCT AGGTCTCGCC
GCTCATAATC CCAACGGGGT ACTTATCGTA GGCGCTACTC CCTGGTCAGT CGATCTAGCC
CGCTCGCTTA AAAAACTAGG CATTCCCGTG ATTGTAAACG ACACTTCATG GCATCACTTA
CGGGCTGCGC GCCTATCGAA TTTGGAGATA TACCGGGGAC AAATATTATC TGAAATTGCG
GAAACTTCTC TTGAACTCAA TGCCATCAGC TATGTGCTGG CCGTCACCGC CAATGACGCC
TACAATGCCC TTGTGTGTAC CCGCTTCGCG CCGCAACTAG GTCAAAATCA TGTCTTCCAG
TTGCCTTCCA TAGCAAATTC CAGCGAAAAG GATAAAACCT TTGCCCGCTC GGCGCGAGGG
AGAATCGCCT TTGACGAAAA TACTCAATAT GAGGATTTCA TGCGTCACTA CTACCATGGC
TGGGAATTTC GCAGCACACA ACTCACGGAA GAGTATACCT ATGAGGATTA TCTTCAGGAT
CGTCCCCAGG AATTGATATT AATCGCGGTG GTAACTAAAA ACGGCCAGCT TACCTTTTAT
CCCCTTGCTG GTTTGAATCC TCCTGAAACG GGAGATACCA TCATCAGCTT TAGCCCAGAT
GACTCTGAAA GCTAG
 
Protein sequence
MESDLILIFS FIVVLGVSIQ WLAWRFQVPA IVLLLMAGFA LGPVLGWLDP EQTFGHILPP 
LIALSVAIIL FEGGLNLQWH EYKEAGVDVR RLVSLGLFLT WTLNTAAAHF IAGLSWPIAT
LFGAISVVTG PTVLMPLLKF ARLQRRTAAL LKWEGIINDP LGALLAILVF QYWAVWYWVM
ESPEHGILAA LGNLGLGLLA ATSAGIGFGY LLSWAFHRGH VPEFLKSPVM LGAVLLLYVA
INAVQEEAGL LAVTVAGVVV ANQRLRNIEE LRRFKEHITL ILVSTLFIVL SANIELETLA
RLDWHSLALL GIAIFFVRPL SVYLATLGTG IKWRERLLIA WIAPRGIVAA SMAGLLAFPL
IQQGFKGADQ LLPLVFALIA ATVILHGLTM AGLGRLLGLA AHNPNGVLIV GATPWSVDLA
RSLKKLGIPV IVNDTSWHHL RAARLSNLEI YRGQILSEIA ETSLELNAIS YVLAVTANDA
YNALVCTRFA PQLGQNHVFQ LPSIANSSEK DKTFARSARG RIAFDENTQY EDFMRHYYHG
WEFRSTQLTE EYTYEDYLQD RPQELILIAV VTKNGQLTFY PLAGLNPPET GDTIISFSPD
DSES