Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0521 |
Symbol | |
ID | 3706713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 562994 |
End bp | 564808 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637737031 |
Product | Sodium/hydrogen exchanger |
Protein accession | YP_342573 |
Protein GI | 77164048 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCTG ATCTAATCCT CATTTTTTCG TTTATTGTCG TGCTTGGGGT TAGCATCCAG TGGCTAGCAT GGCGCTTTCA AGTCCCGGCT ATTGTGCTGC TGTTAATGGC TGGTTTCGCG CTTGGACCGG TCTTAGGCTG GCTCGATCCG GAGCAAACTT TCGGCCATAT CCTCCCTCCT TTAATAGCTC TCTCCGTGGC CATCATTTTA TTCGAAGGCG GACTTAACCT TCAGTGGCAT GAATACAAAG AAGCTGGCGT CGATGTAAGG CGTTTAGTCA GCTTGGGATT ATTTTTAACC TGGACCCTCA ATACAGCAGC AGCGCACTTT ATCGCGGGCC TCTCTTGGCC AATAGCTACC CTCTTCGGCG CCATCAGTGT AGTCACGGGT CCTACAGTGC TTATGCCGCT GTTGAAATTT GCCCGCCTTC AGCGCCGTAC GGCGGCGCTG CTTAAATGGG AGGGAATTAT TAATGATCCA CTAGGCGCCT TGCTTGCCAT TTTAGTCTTC CAGTATTGGG CCGTGTGGTA CTGGGTAATG GAGTCCCCTG AGCACGGGAT ACTTGCGGCG CTAGGCAACC TTGGCCTAGG CTTGCTCGCT GCTACCAGCG CAGGTATCGG CTTTGGCTAC TTGTTAAGTT GGGCCTTTCA CCGGGGGCAT GTCCCGGAAT TCCTGAAATC TCCGGTGATG CTTGGCGCCG TACTCTTGCT CTATGTCGCC ATCAATGCCG TCCAAGAAGA AGCGGGGCTG CTAGCCGTTA CCGTGGCAGG CGTCGTCGTC GCCAACCAAC GGCTGCGTAA CATTGAAGAA CTGCGCCGTT TCAAGGAACA TATCACCCTT ATCCTTGTTT CAACGCTCTT TATCGTGTTG AGCGCCAACA TCGAGCTTGA AACGCTCGCC AGACTAGATT GGCACAGCCT TGCCTTGCTG GGCATCGCTA TCTTTTTCGT GCGGCCTCTT TCCGTCTATC TTGCCACTTT AGGAACGGGG ATAAAGTGGC GGGAAAGATT GCTCATCGCC TGGATTGCTC CCCGAGGCAT TGTCGCCGCT TCAATGGCGG GTTTACTGGC CTTCCCTCTT ATCCAGCAAG GTTTTAAAGG CGCCGATCAA CTCCTGCCGT TAGTCTTTGC GCTGATCGCC GCTACCGTCA TTCTGCACGG TCTCACCATG GCGGGGCTAG GACGTCTTCT AGGTCTCGCC GCTCATAATC CCAACGGGGT ACTTATCGTA GGCGCTACTC CCTGGTCAGT CGATCTAGCC CGCTCGCTTA AAAAACTAGG CATTCCCGTG ATTGTAAACG ACACTTCATG GCATCACTTA CGGGCTGCGC GCCTATCGAA TTTGGAGATA TACCGGGGAC AAATATTATC TGAAATTGCG GAAACTTCTC TTGAACTCAA TGCCATCAGC TATGTGCTGG CCGTCACCGC CAATGACGCC TACAATGCCC TTGTGTGTAC CCGCTTCGCG CCGCAACTAG GTCAAAATCA TGTCTTCCAG TTGCCTTCCA TAGCAAATTC CAGCGAAAAG GATAAAACCT TTGCCCGCTC GGCGCGAGGG AGAATCGCCT TTGACGAAAA TACTCAATAT GAGGATTTCA TGCGTCACTA CTACCATGGC TGGGAATTTC GCAGCACACA ACTCACGGAA GAGTATACCT ATGAGGATTA TCTTCAGGAT CGTCCCCAGG AATTGATATT AATCGCGGTG GTAACTAAAA ACGGCCAGCT TACCTTTTAT CCCCTTGCTG GTTTGAATCC TCCTGAAACG GGAGATACCA TCATCAGCTT TAGCCCAGAT GACTCTGAAA GCTAG
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Protein sequence | MESDLILIFS FIVVLGVSIQ WLAWRFQVPA IVLLLMAGFA LGPVLGWLDP EQTFGHILPP LIALSVAIIL FEGGLNLQWH EYKEAGVDVR RLVSLGLFLT WTLNTAAAHF IAGLSWPIAT LFGAISVVTG PTVLMPLLKF ARLQRRTAAL LKWEGIINDP LGALLAILVF QYWAVWYWVM ESPEHGILAA LGNLGLGLLA ATSAGIGFGY LLSWAFHRGH VPEFLKSPVM LGAVLLLYVA INAVQEEAGL LAVTVAGVVV ANQRLRNIEE LRRFKEHITL ILVSTLFIVL SANIELETLA RLDWHSLALL GIAIFFVRPL SVYLATLGTG IKWRERLLIA WIAPRGIVAA SMAGLLAFPL IQQGFKGADQ LLPLVFALIA ATVILHGLTM AGLGRLLGLA AHNPNGVLIV GATPWSVDLA RSLKKLGIPV IVNDTSWHHL RAARLSNLEI YRGQILSEIA ETSLELNAIS YVLAVTANDA YNALVCTRFA PQLGQNHVFQ LPSIANSSEK DKTFARSARG RIAFDENTQY EDFMRHYYHG WEFRSTQLTE EYTYEDYLQD RPQELILIAV VTKNGQLTFY PLAGLNPPET GDTIISFSPD DSES
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