Gene Noc_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0515 
Symbol 
ID3706687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp556418 
End bp557062 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content51% 
IMG OID637737025 
Productribosomal protein L25 
Protein accessionYP_342568 
Protein GI77164043 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID[TIGR00731] ribosomal protein L25, Ctc-form 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACC TATTTGAACT CCACGCCGAT GTCCGCGTTG AGCAGGGAAA AGGTGCGAGC 
CGCCGCCTGC GTCGCGCCGG CAAGGTGCCC GCCGTTTTAT ATGGCGCTGC AAAAGAGCCT
ATTTCTCTTC TTTTTGATCA TAACTTGCTT TTTCGGCATC TAAGCCATGA TGCATTTTAC
TCCCATATCT TAACTATCCA TGCGAATGGC AAGGCGGAAA GGGTGGTCCT TAAAGCCTTG
CAACGAGATC CGGTTAATCC CAACAAAGTG CTCCACCTGG ATTTGCAACG AGTTAGCTCT
ACCCAAAAGC TGACTATCAA GGTGCCTCTA CATTTTATTG GCGATGAGAT GGCTCCTGGG
GTGAAGCAAG AAGGCGGTAC GGTGGCCCGT CTTCTGAACG ATATTGAGAT TAGTTGCTTG
GCTAAAGACT TGCCTGAGTA TATCGAAGTT GATTTAGCCG ATTTAGGGGT TGGCGAGACG
GTCCATCTAT CCGATCTGAA GCTCCCCGGG GGGGTTGAGA TTCCAGCATT GAAGCTTGGC
GAGGATTACG ATCAACCGGT GGTCACTATC CATAAGCCCC GGGCTGCTGC CGAGGAAGAA
GATACAGGCG CTGAAGGCGA CGTTGAAGCC GCTGATGCCG AATAG
 
Protein sequence
MENLFELHAD VRVEQGKGAS RRLRRAGKVP AVLYGAAKEP ISLLFDHNLL FRHLSHDAFY 
SHILTIHANG KAERVVLKAL QRDPVNPNKV LHLDLQRVSS TQKLTIKVPL HFIGDEMAPG
VKQEGGTVAR LLNDIEISCL AKDLPEYIEV DLADLGVGET VHLSDLKLPG GVEIPALKLG
EDYDQPVVTI HKPRAAAEEE DTGAEGDVEA ADAE