| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0499 |
|---|
| Symbol | |
|---|
| ID | 3706670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 537627 |
|---|
| End bp | 538979 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637737008 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_342552 |
|---|
| Protein GI | 77164027 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGACG ACCCCCTAGC GAGAGTGCGA AGTGGAACGG CGCATCGAGC GCGAGGGTCC
CATAAAGTGA TGTTGGCGGC GGGCAAAATT CGCGGTAAAA TAAGCGCGGC TAGAGGGTGC
TTGCAACACC ACCTAGCCAC TTGCCACCGA CCCAATGAGA AAAGCATTGA GGCCATGACC
GAGCACGATT CTACCACTGT TCAGCGGTCC TATACATTCC GCTTCTACCC CACGAGTGTC
CAGCGCCAGC AACTGGCTAT GGAATTCGGC CATGCCCGGT GGGTATGGAA CACCTGTCTG
ACCTGGCGGG GCCGTCAATA TAGGGTACAT GACAAGCGCG TGACTGGCGT TGATTTTAGC
CGCCAGCTCA CGTTCCTCAA AGGGTTAGGC CCGTACGCTT GGCTCAAGGA GGCCAGCGCC
ACCTGCCTGA TCCAAAAGCT CAGGGACCAG GACACGGCCT TCAGGCATTT TTTTGCGGGG
CGAGCGAAGT ATCCCCGTTT CAAAAAAAGA ACGCATACCC AAAGCATCCG CTATCAACTC
GATCAACGTC AGGTAGCAGG CATGTATCGA GCGGGCGAGT TTCTTAAATT GCCCAAACTC
GGGGCACTCA AGCTCAAGTG GTCCCGCAAG CCCCAGGGCA TCCCCAAGAT GGTGACGGTC
ACCCAGGATT GCGTCGGCCG TTATTGTGTT TCGTTCATGT GCGAGGAAAC CCTCCAACCC
CTACCGCGAA AGCCAAACGG TATCGGTGTT GATTTAGGGG TGTGCGATGT GGTGGTGACC
TCCGAGGGCT GGAAGTCCGG TAATCCTCGG CACCTACGCA CGCATACCCG GCAACTCAGA
AAAACCCAGC GCAGGCTATC CCGCAAGCGT AAGAGCAGTG TTCGTTGGCA TCGTCAGCGG
ATACGGGTTG CTAAAGCTCA TGCCAGGGTG AGCAATACCC GCCAGGATTG GCTGCACAAG
CTCACCACGG CGCTGATTCG CCAGGCGGGG TTCATTGCCA TGGAAACGCT CAACGTCAGG
GGCATGATGG CCAATAGACG GCTATCCAAG GCGTTGGGCG ATGTGGGGAT GCATGAACTC
AAGCGGCAAA TGGAATACAA GGCTAAGTGG TATGGCCGCG AGTTTAGGCA AGTAGACCGC
TGGGCGCCCA CCAGTAAAAC GTGCTCGGTG TGTGGCGCAG TGCAAAAAGC CATGCCGCTC
AAGGTCCGCG AGTGGACCTG CCCGGACTGC CAAACAGCCC ATGACCGCGA CATCAACGCG
GCCAGAAATA TTTTAATTTT AGCTACCGGC GGGAGGCCGG GAAGTCATGC GCGTGGAGGA
GTATACCAAC CGGCGGCGGC TTATGGCTGC TAA
|
|---|
| Protein sequence | MYDDPLARVR SGTAHRARGS HKVMLAAGKI RGKISAARGC LQHHLATCHR PNEKSIEAMT
EHDSTTVQRS YTFRFYPTSV QRQQLAMEFG HARWVWNTCL TWRGRQYRVH DKRVTGVDFS
RQLTFLKGLG PYAWLKEASA TCLIQKLRDQ DTAFRHFFAG RAKYPRFKKR THTQSIRYQL
DQRQVAGMYR AGEFLKLPKL GALKLKWSRK PQGIPKMVTV TQDCVGRYCV SFMCEETLQP
LPRKPNGIGV DLGVCDVVVT SEGWKSGNPR HLRTHTRQLR KTQRRLSRKR KSSVRWHRQR
IRVAKAHARV SNTRQDWLHK LTTALIRQAG FIAMETLNVR GMMANRRLSK ALGDVGMHEL
KRQMEYKAKW YGREFRQVDR WAPTSKTCSV CGAVQKAMPL KVREWTCPDC QTAHDRDINA
ARNILILATG GRPGSHARGG VYQPAAAYGC
|
|---|
| |