| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0490 |
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| Symbol | |
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| ID | 3706661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 527266 |
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| End bp | 528141 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637736999 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_342543 |
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| Protein GI | 77164018 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000860962 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCT ATTTATCTCT TATTTCTACT TTAACTGACT TAAAAAACAC TATTGGAATA
AGTATGGCCC ATTCTAGACC CAACATTCAT GGCCACTACC GCCGGTCCAC CCCTAAATCC
TTTGTGTACG GACCCGCTAA AAGCCACGGT GGAATTTTAT CCATAGTCAT TGTGCTCTTA
TTGATTGTAG TATTAGCAAC AGGTGCGGTG TGGGTATACC TTGGACGCCA GGATGAAGAA
GTAAAGGTGA GCAACAAGGA TAATGATGCA CTCGTTCCAC AAGTAAGTGC AACTAAATCC
ACGGAACCCG GATCTACTGA ACTAGCTGCG GACGATCAAA AATATAAATC AGTTCCTAAA
GAAAAGAAAA CCACGCCAGA AGATGAAAAG GACGAATTTG CCGCGATTTT AGAGGAATTA
AATAGGGAGG AAGAGAAGGC TGAATTCGAG AAATCCAGAG AGTCTTCTCC ACAGCTAGCG
CGGGAGGATA AGATGCCTGC CCAGGCACCC CCTGAACAGG CCGACACCCC AAATAAGGAA
GACACATTTG AACAAACCTC CAAGGAACCT TACGAGAGAG GAAAAGTTCC AACAGCGGAA
GAGCTGGGGA ACACGGACTC TTCCCGCTCT AAATCTACCA AACTTCCTCC CATTCAATCA
GAACAACCCA AACCTTCGGG AAAAGGCCAG GAAGGAGAAG GAATTAACTC AAAATTAATC
ACTGTTCAAC AGGGTGATTC TCTCTCTACT ATTGCCGCGA GAGTCTACGA CGATGCCAAT
AAATGGCGCT TGATTTACAA GGCAAACAAG GACAAGATCA AAAATCCCAA CCAATTATCG
GTGGGGACTA AGCTAACCAT TCCTGCGTCG AAATAA
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| Protein sequence | MKVYLSLIST LTDLKNTIGI SMAHSRPNIH GHYRRSTPKS FVYGPAKSHG GILSIVIVLL
LIVVLATGAV WVYLGRQDEE VKVSNKDNDA LVPQVSATKS TEPGSTELAA DDQKYKSVPK
EKKTTPEDEK DEFAAILEEL NREEEKAEFE KSRESSPQLA REDKMPAQAP PEQADTPNKE
DTFEQTSKEP YERGKVPTAE ELGNTDSSRS KSTKLPPIQS EQPKPSGKGQ EGEGINSKLI
TVQQGDSLST IAARVYDDAN KWRLIYKANK DKIKNPNQLS VGTKLTIPAS K
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