| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0471 |
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| Symbol | |
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| ID | 3706642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 505981 |
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| End bp | 507786 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637736980 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_342524 |
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| Protein GI | 77163999 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA TAGTCAGCGA TTTTCTCTTA CACCGATTGA ACGAATGGGG CATCAACCGG
ATTTACGGCT ATCCCGGGGA TGGCATCAAT GGAATCGTCG GCGCCCTGGA CCGGCTTCAA
GACCGGATAG AGTTTATTCA AACCCGGCAT GAGGAAATGG CGGCTTTTAT GGCCTGCGCC
CATGCTAAAT TTACCGGCGA AGTAGGCGTC TGCCTGGCCA CTTCAGGACC CGGGGCCATC
CACCTGCTGA ATGGCCTTTA TGATGCCAAA CTGGACCATC AGCCGGTGGT GGCCATTGTG
GGCCAACAAT CCCGCGCCGC CCTCGGGGGA GATTATCAAC AAGAAGTGGA TCTCATTTCC
TTGTTCAAGG ATGTCGCCCA TGAATACGTA CATATGTGCG CTACTCCCGC CCAGGTGCGC
CATTTAATTG ATCGCGCGGT CCGCATTGCC AAAACAGAGC GCACCGTGAC CTGCCTTATC
TTTCCCAATG ACGTGCAGGA ATTGGAAGCC GTTGAGAAAC CGCCACGGGC TCACGGCACC
ATCCATTCCA GCACCGGGTA TACGATCCCC CGGGTGATTC CTCATCAGCA AGATCTCCAA
CAAGCTGCCG AGGTGCTCAA TAGAGGCAAA AAGGTCGCTA TCCTGGTGGG AGCTGGCGCT
TTGGGGGCCA CGGATGAAGT TATTCAGGTC GCTGAACTGC TCGGCGCAGG GGTAGCGAAA
GCCTTGCTGG GCAAGGGCGC TCTGCCTGAT GAACTTCCCT TCGTGACCGG CGCTATCGGC
CTGCTGGGGA CTAAACCGAG CTGGGAATTA ATGGACGGCT GCGATACGCT GTTGATGATT
GGTTCAAGTT TCCCCTATTC CGAATTCCTG CCGGAGGAAG GCCAAGCCCG GGGCGTGCAG
ATTGACCTGG ACGGGCGCAT GCTGGGAATC CGCTATCCCA TGGAAGTGAA TCTGGTGGGA
GACAGTGCGG AAACCCTGCG GGCCTTAATC CCTCTTCTCA CACGAAAAAC GAACCGGGCC
TGGCGAGAGA AGATCGAAAA AGACGTGGCC CAATGGTGGC AGGTACTCGA AAGCCGCGCC
ATGCACGATG CGGACCCTAT TAACCCCCAG CGGGTTTTCT GGGAGCTTTC TTCCCGACTG
CCGGATAACT GCATCATCAG CAGCGACTCC GGTTCCGCCG CCAACTGGTA TGCCCGGGAT
CTTAAAATCC GCCGAGGTAT GATGTGCTCT CTCTCGGGGG GCTTGGCGAC CATGGGCCCC
GGCGTTCCCT ATGCCATTGC GGCCAAATTC GCCTTTCCGG ATCGGGTGGC TATTGCCCTT
GTAGGGGATG GAGCCATGCA GATGAACGGC AACAGCGAAC TGGTCACCGC AGCTAAATAT
TGGCAACAAT GGCAAGATCC CCGGCTGATT GTCTTGGTAC TCAATAATCG GGATCTCAAT
CAAGTCACCT GGGAGCAGCG GGTGATGTCG GGCGATCCCA AGTTCGAAGG CTCCCAAAGC
TTGCCCGACT TTCCCTATGC CCGTTATGCC GAACTACTTG GCTTTAAAGG CATCCGCGTT
GATCGGCCGG AAAGTATCGG CCCCGCTTGG GAGGAAGCCC TAGCCGCTGA CCGACCCGTA
ATACTAGAAG CGTATACCGA TGGGAACGTG CCGCCCTTGC CTCCCCATAT CAAGCTGGAA
CAGGCCAAAG CCTATGTCTC CGCCTTGCTG CACCGAGATC CGGAAGCCAT CAACATTATT
AAGCAGTCCA TCAAGGAAAT TAAAGAAAGC TGGTTTTCCA GTGGTCAAGA AGAAAAGGGC
AATTAG
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| Protein sequence | MSQIVSDFLL HRLNEWGINR IYGYPGDGIN GIVGALDRLQ DRIEFIQTRH EEMAAFMACA
HAKFTGEVGV CLATSGPGAI HLLNGLYDAK LDHQPVVAIV GQQSRAALGG DYQQEVDLIS
LFKDVAHEYV HMCATPAQVR HLIDRAVRIA KTERTVTCLI FPNDVQELEA VEKPPRAHGT
IHSSTGYTIP RVIPHQQDLQ QAAEVLNRGK KVAILVGAGA LGATDEVIQV AELLGAGVAK
ALLGKGALPD ELPFVTGAIG LLGTKPSWEL MDGCDTLLMI GSSFPYSEFL PEEGQARGVQ
IDLDGRMLGI RYPMEVNLVG DSAETLRALI PLLTRKTNRA WREKIEKDVA QWWQVLESRA
MHDADPINPQ RVFWELSSRL PDNCIISSDS GSAANWYARD LKIRRGMMCS LSGGLATMGP
GVPYAIAAKF AFPDRVAIAL VGDGAMQMNG NSELVTAAKY WQQWQDPRLI VLVLNNRDLN
QVTWEQRVMS GDPKFEGSQS LPDFPYARYA ELLGFKGIRV DRPESIGPAW EEALAADRPV
ILEAYTDGNV PPLPPHIKLE QAKAYVSALL HRDPEAINII KQSIKEIKES WFSSGQEEKG
N
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