Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0470 |
Symbol | |
ID | 3706641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 504875 |
End bp | 505978 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637736979 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_342523 |
Protein GI | 77163998 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCC GGAGCCTTGA AGTTCCCGTC GAAAAATTGG AAGTTTCCGC TTACCAGATT CCTACCGATT TTCCCGAGGC GGATGGAACG CTGGGCTGGG ATTCAACAAC CATCATCGTG GTCAAACTCC ATGGCGGCGG TAAAGCAGGA CTGGGTTACT CCTACGGAAG TAAGGCGGTA GCGGTTTTAA TTGATAATCA ACTCCGCAAA ACGGTCATCG GCCAGGATGC CATGGCCATT GCCGGCAGAT GGCAAGCCAT GGTGAAAGCC ATCCGTAACC TGGGCCGGCC CGGCATCTGC TCCATGGCCA TTGCCGCCGT GGATACCGCC CTGTGGGATC TGAAAGCCCG TCTCCTTGAT TTGCCTTTGG TCACCCTGCT GGGCGCGGCG CGGGCGGAGG CGCCGGTTTA TGGCAGCGGC GGCTTTACCA GTTATTCCCC TGAACAGCTT CAGCAACAAC TGGGCGGCTG GGCAAACGAG GGGATTCAGG CGGTCAAAAT GAAAGTAGGA AGCGATCCGG AGCAGGACCC GAAACGGGTA CAGCTTGCAC GGGAGGCTAT CGGTGAGGGG GTGGCGTTGT TTGTGGATGG CAATGGCGCC TATGGGCGTA AACAGGCGCT GGCCCTAGCC GACTCCTTTA CCAAATACAG GGTCACGTGG TTTGAAGAAC CGGTTTCATC TGATGATCTG GAGGGCCTTC GCTTGCTTCG CGACCGGGGT CCAGCCGGGA TGGATATCGC CGCCGGAGAG TACGGCTATG ATCAGTATTA CTTCCGCCGT ATGTTGGCTG CTGGCGCGGT GGACGTGCTG CAAGCGGACG CCACCCGCTG CGCCGGCATC ACCGGCTTTA TGGCGGCCAG CGCCCTTTGC CAGGGCTATG GGATTCCCCT TTCCGCCCAT ACAGCGCCTT CCCTCCACGC CCATCCTGTC TGCGCGCTCC CCCATATCCG CCCCCTGGAG TATTTCCACG ATCATGTCCG CATTGAAGCG ATGTTCTTCG ACGGCGTTCT TAAACCCGTA AACGGCGCCC TCCAGCCGGA TACTTCCCGT CCTGGATTGG GCCTAGAGTT ACGGGAGGCG GATGCCGTCC AGTATGCGGT TTAA
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Protein sequence | MNARSLEVPV EKLEVSAYQI PTDFPEADGT LGWDSTTIIV VKLHGGGKAG LGYSYGSKAV AVLIDNQLRK TVIGQDAMAI AGRWQAMVKA IRNLGRPGIC SMAIAAVDTA LWDLKARLLD LPLVTLLGAA RAEAPVYGSG GFTSYSPEQL QQQLGGWANE GIQAVKMKVG SDPEQDPKRV QLAREAIGEG VALFVDGNGA YGRKQALALA DSFTKYRVTW FEEPVSSDDL EGLRLLRDRG PAGMDIAAGE YGYDQYYFRR MLAAGAVDVL QADATRCAGI TGFMAASALC QGYGIPLSAH TAPSLHAHPV CALPHIRPLE YFHDHVRIEA MFFDGVLKPV NGALQPDTSR PGLGLELREA DAVQYAV
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