| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0468 |
|---|
| Symbol | |
|---|
| ID | 3706639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 503143 |
|---|
| End bp | 504471 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637736977 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_342521 |
|---|
| Protein GI | 77163996 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4325] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC TGACTTATCT ATGGGAAGCT CTACGCGAAA GCTTGTGGTT CATCCCGATG
TGTATTGTCA TCGGTGCAGT CCTCCTTGCA TTGGGGCTGA TCGAGCTAGA GGCGGCTGTA
GAACGCGAGC AGCTGGCAGA GCATTGGCCC ACACTATTCG GAGTTGGAGC GGATGGCTCG
CGCGCGCTGC TTTCAGCGAT CGCCAGCTCC ATGATCACCG TTGCTGGCGT TACCTTTTCG
ATCACGGTCG TCGCTCTGTC TTTGGCCTCG AGTCAGTATA CGTCACGCAT CTTACGAAAT
TTTATGCGGA ATCGGAGCAA CCAAGCAGTC CTCGGCGTCT TTGTGGGCGT CTTTGCTTAT
TGTCTCGTGG TGCTGCGGAC GATTCGCGGT GGCGATCAAG GGGTATTTGT CCCGGGATTA
GCGGTACTCG GTGCCCTACT GCTGGCATTC GTAGCCATCA GCTTTCTCAT CTTTTTCATC
CATCATATTG CCACCTCAAT TCAAGCTACA AGTATTATTA AGTCGGCAGC CACAGAGACT
CTTGAAGCCA TTGACCGTTT GTTCCCCACG GAGATAGGTG AGGCCACCGC CGAGCATGTG
GGTAATGCTC CAGGAGCAAG AGTGGACTTG GCGGCCCAGG CGTGGATAAC TATCCCCGCT
CAACAATCTG GCTATATTCA AGGGATCGAC GCCGATGCCC TGCTTCACGT CGCCTGCGCT
CAGGACATCA TCGTGCGGAT GGAAAAGGAA ATTGGCGAGT TCGTCATCGA AGCTTCCCCC
CTTGTGTCCG TAACTGGCAA GTCGCCAGGT GATGAGACCA TTTGGGAGCT GAACGCAGCC
TACACGATAG ACTGGCGCCG CGCGGTGGAG CAGGACGCGA CCTACGGTAT CCAACAGATC
GTGGATGTGG CGCTCAAGGC GCTGTCACCC GGCATCAACG ACACCACCAC CGCAATTATT
TGTGTTGACT TCCTAGGGAT GATTCTTGCA CGTCTCATCG CCCGGCACAT TGAAACACCC
TACCACTCTG ATAACGGGCA GCTACGTCTC ATTACTCGCG GTCCCACTTT TTCTAATTTA
CTATCCCAAG CCTTTGATCA AATTCGCCGG AACGCCGAAG GTAATGTTGC CGTCCTCATT
CGGCTTCTTC AGAGTCTGGA AACGCTTACC AAGTTAACGG TGAACGTACA ACGGCATCAG
GCGCTCCGTC AACAAGCCGC TCTCATCATT GAAACAGCCG AGCGTACTGT CCCCATGGCC
TATGATCGCA TGCCCATTCA AGCAATCCGA GATCGCATCT TTCCACTGCC GGCCGATGAA
AGCCGGTAA
|
|---|
| Protein sequence | MNKLTYLWEA LRESLWFIPM CIVIGAVLLA LGLIELEAAV EREQLAEHWP TLFGVGADGS
RALLSAIASS MITVAGVTFS ITVVALSLAS SQYTSRILRN FMRNRSNQAV LGVFVGVFAY
CLVVLRTIRG GDQGVFVPGL AVLGALLLAF VAISFLIFFI HHIATSIQAT SIIKSAATET
LEAIDRLFPT EIGEATAEHV GNAPGARVDL AAQAWITIPA QQSGYIQGID ADALLHVACA
QDIIVRMEKE IGEFVIEASP LVSVTGKSPG DETIWELNAA YTIDWRRAVE QDATYGIQQI
VDVALKALSP GINDTTTAII CVDFLGMILA RLIARHIETP YHSDNGQLRL ITRGPTFSNL
LSQAFDQIRR NAEGNVAVLI RLLQSLETLT KLTVNVQRHQ ALRQQAALII ETAERTVPMA
YDRMPIQAIR DRIFPLPADE SR
|
|---|
| |