Gene Noc_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0440 
Symbol 
ID3706611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp477642 
End bp478046 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content60% 
IMG OID637736950 
ProductPilT protein-like 
Protein accessionYP_342494 
Protein GI77163969 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000179252 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGCT ACTTGCTGGA TACCAACATC TGCATTTTCA CCATTAAGAA CCGACCGGCG 
CGGGTTCGTG AGCGCTTCAA GCAGTTTGCC GATCAGTTGT GCATCAGCAG CGTGACCTGG
ATGGAGCTGG TGTATAGCGT GGAGCGCTCA GCCAACCCGC AACACAATCT GGCGATTGCG
GAGGGGCTGG CGGCGCGTCT CAGCGTGCTG GATTACGACG TCGAAGCGGC CAGCCACACG
GGGCAGATCC GTGCTGAACT TGCGCGCCGT GGAACACCGA TAGGGCCGTA TGATCAAATG
ATAGCCGGAC AGGCGCGCAG CCGTGGGCTG GTTGTGGTCA CCAACAACAC GTGCGAGTTC
GCACGCGTTC CCGGCCTGCG ATGCGAGGAC TGGACAAAGC CATGA
 
Protein sequence
MLRYLLDTNI CIFTIKNRPA RVRERFKQFA DQLCISSVTW MELVYSVERS ANPQHNLAIA 
EGLAARLSVL DYDVEAASHT GQIRAELARR GTPIGPYDQM IAGQARSRGL VVVTNNTCEF
ARVPGLRCED WTKP