| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0439 |
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| Symbol | |
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| ID | 3706610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 476041 |
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| End bp | 477645 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637736949 |
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| Product | Type I restriction-modification system M subunit |
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| Protein accession | YP_342493 |
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| Protein GI | 77163968 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00153392 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGGG ATCAACTCAG CCAGCTTGGC AAAACCCTTT GGGCCATTGC CGACGATCTG
CGCGGCGCCA TGAATGCCGA TGACTTCCGC GACTATATGC TGTCGTTTTT GTTCTTGCGC
TATCTGTCCG ATAACTACGA AGCGGCGGCG AAAAAAGAAC TGGGGCCGGA CTATCCCAAG
CTGGCCGACG ACGACCGCCG CGCGCCCTTG GCGGTGTGGT ATGAGGATAA TGCCGAGGAT
GTGGCCGCCT TTGAAAAACA GATGCGCCGC AAGATGCACT ATGTCATCCA CCCGGATTAT
CTATGGAGCA GTATTGCCGA GCTGGCTCGC ACCCAGGATG AGGAGCTCTT GCAAACATTG
GCGGGCGGCT TTAAACACAT TGAAAACGAG TCCTTCGCCA GCACTTTTCA GGGCTTGTTC
TCGGAAATTA ATCTGCGTTC GGAAAAGTTG GGCAGAACCC TCGCGGACCA AAACAGAAAG
CTTTGCACCA TCATCACTAA AATCGCCAAG GGCATCGCAC GGTTCTCCAC CGGCAGCGAT
ATTCTGGGCG ATGCCTATGA ATATCTGATT GGCCAGTTCG CCGCTGGTTC CGGCAAAAAG
GCCGGCGAGT TTTACACCCC CCAAAGCGTC TCCACCATCC TCTCCCGCAT TGTGACACTG
GACAGTCAGG AGCCCTCCAC CGGCAAAAAG AAAAAGCTTA ATCGCGTGCT GGATTTTGCC
TGTGGTTCCG GCTCGTTGCT GCTCAACGTG CGCAACCAAA TGGGGCCGCG GGGTATCGGC
ATGATCTACG GCCAGGAAAA GAATATCACC ACCTATAACC TGGCGCGCAT GAATATGCTG
CTCCATGGCA TGAAGGATAC CGAGTTCCAG ATCCACCACG GCGATACGCT GGAAAACGAC
TGGGCTATTC TCAACGAGAG GAACCCCGCT AAAAAACTCC AATGCGATGC GGTCGTGGCC
AACCCGCCGT TCAGTTATCG CTGGGAGCCC GACGAGGCCA TGGGCGAGGA TTTCCGCTTC
GAAAGCCACG GCCTTGCCCC CAAATCAGCG GCGGATTTCG CCTTTCTACT CCACGGCCTT
CACTTTTTGA GCGACGAGGG CACCATGGCC ATTGTCCTGC CCCACGGCGT CCTTTTTCGG
GGCGGCGCGG AAGCGCGTAT CCGCACCAAA TTGCTGAAAG ACGGCCACAT CGATACCGTG
ATCGGCCTGC CCTCCAATCT GTTTTTCTCC ACCGGCATAC CGGTATGTAT TCTGGTGCTG
AAAAAGTGCA AAAAGCCCGA CGACGTACTG TTTATCAATG CCAGCGAGCA CTTTGAAAAA
GGCAAGCGCC AAAACGCCCT ACGGCCCGTG GACATAGATA AAATTGTTGA TACCTATCAA
TACCGCAAGG AAGAGGAACG CTACGCCCGG CGCGTCAGTA GGGAGGAGAT CGAGAAAAAC
GATGACAACC TCAATATTTC CCGCTACGTC AGCACCGCTA AGCCTGAGCC AGAGGTGGAC
CTAGATGACG TTCATAAAAA GCTCACCGCT ATTGAGCAGC GCATATCGCA AACAACAGAA
ACCCATAATC AGTTTCTCAA AGCATTGGGG CTGCCAATAT TGTGA
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| Protein sequence | MTRDQLSQLG KTLWAIADDL RGAMNADDFR DYMLSFLFLR YLSDNYEAAA KKELGPDYPK
LADDDRRAPL AVWYEDNAED VAAFEKQMRR KMHYVIHPDY LWSSIAELAR TQDEELLQTL
AGGFKHIENE SFASTFQGLF SEINLRSEKL GRTLADQNRK LCTIITKIAK GIARFSTGSD
ILGDAYEYLI GQFAAGSGKK AGEFYTPQSV STILSRIVTL DSQEPSTGKK KKLNRVLDFA
CGSGSLLLNV RNQMGPRGIG MIYGQEKNIT TYNLARMNML LHGMKDTEFQ IHHGDTLEND
WAILNERNPA KKLQCDAVVA NPPFSYRWEP DEAMGEDFRF ESHGLAPKSA ADFAFLLHGL
HFLSDEGTMA IVLPHGVLFR GGAEARIRTK LLKDGHIDTV IGLPSNLFFS TGIPVCILVL
KKCKKPDDVL FINASEHFEK GKRQNALRPV DIDKIVDTYQ YRKEEERYAR RVSREEIEKN
DDNLNISRYV STAKPEPEVD LDDVHKKLTA IEQRISQTTE THNQFLKALG LPIL
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