Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0393 |
Symbol | |
ID | 3706564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 435130 |
End bp | 435981 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637736905 |
Product | modification methylase HemK |
Protein accession | YP_342449 |
Protein GI | 77163924 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | [TIGR00536] HemK family putative methylases [TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.27942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGCTTA ATTTTTCAAT AGCCGAGGCA ATTGAATTCG CCGGAAATCG CTTAGTTTCC GGGGATGGCG GACGTTTAGA GGCTGAGAGG CTGCTAGCTT ACCTGCTCAA GGTAGAACGG AGTTATCTTT ATGCTTGGTC CGATAGGCGG TTGACGCCAA CCCAATGGGT CAGCTTCCAA CGGCTATTGC AGCGCCGGGC CAAGGGTGAA CCTTTGGCTT ATATTCGCGG CTGGCAGGAG TTTTGGTCTC TTAACTTGCA AGTCACGGAG GCCACGTTGA TTCCGCGTCC GGAAACGGAA CAAGTAGTGG AATTGGCCCT CCAGCGGCTA GATTTAGAGC GGGCGCTTAA CGTTGCCGAT TTGGGAACGG GTAGCGGCGC TATCGCGCTT GCCATGGGGA GCGAGCGGCC TCGGGCGCGG GTAATTGCAA CCGACGTTTC GGCAGAGACT TTGGAGGTGG CTAGGGAAAA TGGGCGGCGC CTTGGGCTAT GCAATGTAAC CTTCCGGTTA GGCGATTGGT TCGTCCCGTT AGTGGGGGAA CGCTTCCACC TCATTGCCAG CAACCCTCCC TATATTGCCG AAGGGGACCC TCATCTAACC CAGAATGGTT TAGCCTTTGA GCCTGATATC GCCTTGATCG CAAAAGATAA AGGTTTAGGG GCGGCACGCC ATATTGCCAT GACTGCCCGA GAGCACCTCC TTGATGGAGG GTGGTTATTG CTGGAGCATG GCTATGAGCA GGGACCGTCC CTGTTAGCCC TATTTACCCA GTTAGGCTAC CAGCAAGTAG CTGATTTTTG TGATTTGGCC GGTTTGCCCC GCGTGGTGGC TGGGCAGTGG CGGGCTTGCT AA
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Protein sequence | MTLNFSIAEA IEFAGNRLVS GDGGRLEAER LLAYLLKVER SYLYAWSDRR LTPTQWVSFQ RLLQRRAKGE PLAYIRGWQE FWSLNLQVTE ATLIPRPETE QVVELALQRL DLERALNVAD LGTGSGAIAL AMGSERPRAR VIATDVSAET LEVARENGRR LGLCNVTFRL GDWFVPLVGE RFHLIASNPP YIAEGDPHLT QNGLAFEPDI ALIAKDKGLG AARHIAMTAR EHLLDGGWLL LEHGYEQGPS LLALFTQLGY QQVADFCDLA GLPRVVAGQW RAC
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