Gene Noc_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0389 
Symbol 
ID3706560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp429381 
End bp430601 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content57% 
IMG OID637736901 
Productpolynucleotide adenylyltransferase 
Protein accessionYP_342445 
Protein GI77163920 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTTT ATCTGGTGGG CGGCGCCGTT CGTGACAAGC TCCTAGGACG TCCCGTCAAG 
GAGCGGGACT ATGTGGTCGT GGGAACCACC CCAGCTAACC TGCTCGCCCA GGGCTACCGT
CCGGTAGGAA AAGATTTTCC AGTATTCCTT CACCCCCAAA CCCAAGAGGA ATACGCTCTG
GCCCGGACCG AACGCAAGAC CGGGCCGGGC TATAAGGGCT TCGAGGTGGA TGCCGCCCCT
GATGTTACCC TAGAGGAAGA TCTGCAACGC CGGGATCTAA CAATAAATGC CATTGCCGAG
GCTGCCGACG GCAGCCTTTT AGATCCCTTT GGAGGGCAAC AAGATTTAGC GCGGGGGATT
TTGCGTCATG TCTCGCCGGC TTTTGCAGAA GATCCGGTTC GTATCCTCCG GGCGGCCCGC
TTTGCCGCCC GTTTTAATTT TAAGGTGGCC CCCGAAACCT TGGCCCTCAT GGAAGCAATG
GTGACCGCTG GCGAGGCTGA TCACTTAGTG CCCGAAAGGG TGTGGAGGGA ATTAGAACGG
GCCCTCGGTG AATCCTATCC CCGACGTTTT TTTGAGATTC TCAGAGCTTG TGGAGCTCTG
GCGCGGATTT TCCCTGAAAT TGAATGTCTA TTCGGCGTCC CCCAACCCCG GCGCTATCAC
CCGGAAATCG ACACCGGCAT CCACACGCTG AAAGTGTTAG AGATAGCCGC TCACTTGAGT
TCGGATACCC AAGTCCGTTT CGCTGCTTTA ACCCACGACC TGGGCAAGGG ACAAACGCCC
TCCCATGAAT GGCCCCATCA CTACGGCCAT GGAGAGCGAG GGGTCGCGCT GGTCCTTACT
CTGTGCCAAC GCTTGCGAGT CCCTAAGGCC TATCAAGCCC TCGCGGTCCA GGTGGCCCGT
TACCATAATC TGGTTCACCA AGCCCAGGAA TTGCGTCCTG GTACAATCCT TAAACTGCTC
AATAGAGTCG ACGCCTTCCG GCGGCCTTCC CGATTCGAAC AGTTTTTGCT GGCCTGTGAA
GCGGATGCCC GGGGCCGGTC TGGACTAGAA AACCGGCCCT ATCCCCAGGC TAACCAGCTT
CGATTAGCCT TTCGCGCGGC GGCTGCGGTA ACAGCCCGTC CTCTGGTGGC GGCCGGTTTG
CGAGGAGAGG CGATTGCAGA GCAACTCCAG CAACAGCGAA TAAAAGCCAT AAAGCAAGCC
GTTCACACTG AACGAGGTTA G
 
Protein sequence
MEVYLVGGAV RDKLLGRPVK ERDYVVVGTT PANLLAQGYR PVGKDFPVFL HPQTQEEYAL 
ARTERKTGPG YKGFEVDAAP DVTLEEDLQR RDLTINAIAE AADGSLLDPF GGQQDLARGI
LRHVSPAFAE DPVRILRAAR FAARFNFKVA PETLALMEAM VTAGEADHLV PERVWRELER
ALGESYPRRF FEILRACGAL ARIFPEIECL FGVPQPRRYH PEIDTGIHTL KVLEIAAHLS
SDTQVRFAAL THDLGKGQTP SHEWPHHYGH GERGVALVLT LCQRLRVPKA YQALAVQVAR
YHNLVHQAQE LRPGTILKLL NRVDAFRRPS RFEQFLLACE ADARGRSGLE NRPYPQANQL
RLAFRAAAAV TARPLVAAGL RGEAIAEQLQ QQRIKAIKQA VHTERG