Gene Noc_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0354 
Symbol 
ID3706525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp387680 
End bp388312 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content49% 
IMG OID637736866 
Productphosphoheptose isomerase 
Protein accessionYP_342410 
Protein GI77163885 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID[TIGR00441] phosphoheptose isomerase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCAA CAAACAAGCC AAATCTTTCC ACTAAAACAG CCATGAACAG CCGAGAACGT 
ATCGAACAAC ATTTTTTCAG CAGCGCCCAG CTTAAATTAT CGGCTATGAA AACCCTGGCC 
CCCGGCATCG AACGTGCCAG CCGCCATCTA TTGGAAAGCC TCCAGCATGG TCATAAAGTT 
TTAAGCTGCG GTAACGGTGG TAGTGCGGCC GATGCCCAAC ATTTCTCCTC GGAACTAATC 
AACCGCTTTG AACGGGAACG CCCTGGTTTA CCCGCAATCG CTCTGACTAC GGATTCTTCG 
GCCTTAACTT CTATTGCTAA CGATTATCAT TATGATAATG TTTTTGCGCG TCAAATCGAA 
GCCTTAGGCA ATGCAGGAGA CATCCTCCTG GCTATTAGCA CCAGTGGACA ATCAACCAGC 
GTTATCCACG GGATTAAAGC CGCCCATGAT TGTGAGATGA CTATTATTGC ATTGACCGGA 
GGCGATGGCG GTAAAATCGC CCCTTTACTG ACTGAACGGG ATGTGGAAAT TCGCGTGCCC 
GCCCACAGTA CCGCCCGTAT CCAGGAAGTA CACCTGCTCG TGATTCACTG TCTATGTGAT 
CTGCTTGATC ATGGCCTGTA CCCGGAGAAA TAA
 
Protein sequence
MMPTNKPNLS TKTAMNSRER IEQHFFSSAQ LKLSAMKTLA PGIERASRHL LESLQHGHKV 
LSCGNGGSAA DAQHFSSELI NRFERERPGL PAIALTTDSS ALTSIANDYH YDNVFARQIE 
ALGNAGDILL AISTSGQSTS VIHGIKAAHD CEMTIIALTG GDGGKIAPLL TERDVEIRVP 
AHSTARIQEV HLLVIHCLCD LLDHGLYPEK