| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0349 |
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| Symbol | |
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| ID | 3706520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 382638 |
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| End bp | 383939 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637736861 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_342405 |
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| Protein GI | 77163880 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTCTCT CAGCGTTACC CTTGCCCCAA CGGGATGTAA TATTGGCAAA GCTCCACCAG
CATCTACAAT CGCCCCACTC CCAACTGGTG GGCCTGCTCA TTATCAAGTT ATGCCATTTT
CGGGAGATCA ACACCGCTTT TGGCTACCAG GCGGGAGACG CGCTTTTAAT CCAATTTGCC
GAACATATTT GCGGACATAT GCGCCCCCAG GATGAGCTCG CCCGGATTGG AGACGCAGAA
TTTAGCCTCA TTTTGCCCTC CCTCCATACC GGGGGCCAGG CATTGCTAGC TGCCAACCGG
GTATGGGAAC TCGCTCAACA ATACCCCTTT ACCGTCAATG GCCATACGCC GTTGCCCCAC
ATCGCTATGG GTATTGCCCT TTGTCCCGAA CATGAAAAAG AGCCCGAATT ATTGTTGCGG
GCAGCCGATT TAGCCGTGGC AGAAGCACAG AAAACGGGAA ACCCTTATCA CATCTATCAT
TCCCAGATGC TTGCCACGGC AACGGCGGAT CTCGTACTTG AAGAAGAATT AGAACATGCC
CTTGAAAATG ATGAATTCAG GCTGTTTTTT CAACCCAAAA TATCATTTTC CACCAATCGG
ATAACAGGAA CGGAAGCCCT TATCCGCTGG CAGCATCCTA CCCAGGGGAT GATTCCTCCC
GGTAAATTCA TACCCTTGAT AGAAAAAAGC GCTCTCATGG AACCCGTGAC TTTATGGGTA
CTGAATACCG CCCTGCGCTA CCGTGCGGAA TGGGCTAAAA AGGGGATTCC CCTCTCCGTG
GCCGTTAATT TTCCGCCTAC TTTGTTAATA AACCCGGAAA TTGCCGAGTT AATACGGCAA
GCCACCCGAA TTTGGGGGAC CGGCCAGGGT GATCTTATCC TTGAGGTTAC GGAAAGCGCC
GTGATGACGG ATCCCAAGCG AAGTCTTGAA ACGCTCCGGC ACCTTGCCGC TCTCGGCATT
GAGCTGTCCA TTGATGATTT CGGTACCGGT TACTCCTCGT TAGCCTATCT AAAAAACATG
CCTGTCAACG AACTTAAAAT TGATAAATCT TTCGTGGATG AAATGGCCGC TAATCAAGGC
GATAGCCTTA TCGTACAAGC GGTTACGGAT CTAGGACATA ATTTTAATTT GCGCGTGACG
GCTGAAGGTA TCGAAGATCA GGCTACCTTA GAAGGTCTTC GAGAAATAGG CTGCGATTAC
GGGCAGGGTT ATTTCCTTGG ACGCCCGATG GCACCTCAAG ATCTGGAAAA CTGGATCAAA
GAATCGCCCT GGGGCATGGC TATCGAAACA GCTACGGCAT AG
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| Protein sequence | MPLSALPLPQ RDVILAKLHQ HLQSPHSQLV GLLIIKLCHF REINTAFGYQ AGDALLIQFA
EHICGHMRPQ DELARIGDAE FSLILPSLHT GGQALLAANR VWELAQQYPF TVNGHTPLPH
IAMGIALCPE HEKEPELLLR AADLAVAEAQ KTGNPYHIYH SQMLATATAD LVLEEELEHA
LENDEFRLFF QPKISFSTNR ITGTEALIRW QHPTQGMIPP GKFIPLIEKS ALMEPVTLWV
LNTALRYRAE WAKKGIPLSV AVNFPPTLLI NPEIAELIRQ ATRIWGTGQG DLILEVTESA
VMTDPKRSLE TLRHLAALGI ELSIDDFGTG YSSLAYLKNM PVNELKIDKS FVDEMAANQG
DSLIVQAVTD LGHNFNLRVT AEGIEDQATL EGLREIGCDY GQGYFLGRPM APQDLENWIK
ESPWGMAIET ATA
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