Gene Noc_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0340 
Symbol 
ID3706511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp370998 
End bp372104 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content54% 
IMG OID637736852 
Product4Fe-4S cluster binding protein 
Protein accessionYP_342396 
Protein GI77163871 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR00276] iron-sulfur cluster binding protein, putative 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.246127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGGAG CAGAGAAAAC GGGACCGGAT CTTCATACTC TAGCCGCTGA CATCAAGCAA 
TGGGGTTATC AGCTAGGTTT TCAGCAGGTA GGTATCGCCG ATATTGAATT GGGGGAGGCG
GAGCAGCATT TGCTGGCCTG GCTTCAGGCT GGACGCCATG GAGAGATGGA CTATATGGCC
CGGCATGGTC TCAAGCGTAC CCGCCCCGAG GAGTTGGTTC CGGGAACCCT TCGAGTCATT
TCAGCACGGA TGGATTACTG GCCCGAGACG GAGGATAATC CTTGGCATAT TCTGGAAGAT
GACTCCCGTG GTTATATTTC CCGCTATGCG TTGGGGCGAG ATTACCATAA AGTATTGCGG
AAACGGCTGC AAAAATTGGC AAAGCAAATT GAAGCGGCTA TTGGGCCTTT TGGTTATCGG
GTCTTTAGCG ATAGTGCCCC GGTGATGGAA AAGGCGCTGG CAGAAAAGGC GGGACTGGGC
TGGATAGGTA AGCATACCAA TCTTCTGGCC CGTGATGTGG GATCATGGTT TTTCCTTGGA
GAAGTCTATA CCGATTTACC TTTGCCGCTG GATGGGGCAA CGACTAGCCA TTGCGGAAGT
TGCCGGGCTT GTATTGATAT TTGTCCTACC CAGGCCATTG TGGCGCCTTA TCAGCTGGAT
GCGCGCCGCT GTATTTCCTA TCTGACCATA GAGCTGCGCG GCGCTATTCC AGAATCTCTG
CGGCCTTTGA TCGGCAATCG AATCTACGGT TGTGATGATT GTCAGCTGAT TTGTCCCTGG
AATCGTTATG CCCAAGTGAC CGGGGAGCAG GATTTCCGCC CCCGCCAGGG GCTGGAGGCT
CCTCAATTGC TGGATTTGTT CGCCTGGAGC GAAGAGGACT TTTTATCCCG GACCGAAGGT
TCGGCGATTC GCCGTATTGG GTATGTGGGT TGGCTGCGTA ATATTGCCGT GGCCTTGGGC
AACGCCGCGC CTCAGCCAGA TATCGTTCAG GCTCTCCGTT CCCGCGCTGA TCATCCGTCG
CCTTTAGTGC GGGAGCATGT GATTTGGGCT TTGGAGGAGC AACTGCGCAA AAGAGCCGTT
CCGGTCCGCC AGGAAAAGAG GGGCTAA
 
Protein sequence
MHGAEKTGPD LHTLAADIKQ WGYQLGFQQV GIADIELGEA EQHLLAWLQA GRHGEMDYMA 
RHGLKRTRPE ELVPGTLRVI SARMDYWPET EDNPWHILED DSRGYISRYA LGRDYHKVLR
KRLQKLAKQI EAAIGPFGYR VFSDSAPVME KALAEKAGLG WIGKHTNLLA RDVGSWFFLG
EVYTDLPLPL DGATTSHCGS CRACIDICPT QAIVAPYQLD ARRCISYLTI ELRGAIPESL
RPLIGNRIYG CDDCQLICPW NRYAQVTGEQ DFRPRQGLEA PQLLDLFAWS EEDFLSRTEG
SAIRRIGYVG WLRNIAVALG NAAPQPDIVQ ALRSRADHPS PLVREHVIWA LEEQLRKRAV
PVRQEKRG