Gene Noc_0337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0337 
Symbol 
ID3706508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp367146 
End bp368564 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content51% 
IMG OID637736849 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_342393 
Protein GI77163868 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000027639 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACGAA TAGCCTACTT TTTAATATGC CTAGTGCCTG TCCTGGCTTT TGCCGGGGTG 
CAGGTACAAG GCGTACGGGT ATGGTCCGCT GAGGAAAAAA CACGGCTGGT ATTTGATTTA
AGCGCCCCTG TCCAACACCG GGTATTTACT CTGGCGAGTC CCCATAGAAT TGTAATTGAT
CTTGCTAACA CCCGCTTAGC CCAGCCTCTA CCTCCCAATA GCCTTAACGG TAAGCTGCTC
CGTGGTCTCC GCAGCGCTAA TAAGAGCACT GGCATTCTGC GAGTAGTCCT TGAGCTGTCC
CACGCTGCGC ATGCCAAAAG TTTTTCGCTC AAACCCTATA AAAATCATAG TCACCGCCTA
GTCATTGATT TAACCCGAAC CGATATTGGA GAATCCCAGC AAAAGCTCGT AAAAACAGTT
GCTGCTATCA CTGACAATAA GCCGCAGCAG ACGACTCATA AGATTAGAAT TGCTCCTGAG
AATAACCCCC CTAGAGGCAA CCCTCCCCAG GGAGGGAAAA GCGAAAAAAC TCAACCAAAT
TCTACTACGA TCATAGCTGC TGCCAGGGAC AAGCCGCGGG ACATTGTCAT TGCCATCGAT
GCAGGTCATG GAGGCGAAGA TCCTGGTGCT ATTGGTCCCC AGGGAACCCA GGAAAAGCAG
GTAGTACTGG CTATTGCCCG GAAACTTGCC CGGTTGCTGG ACCGAGAGCC AGGCATGCGC
CCAGTGATGA TACGCAAGGG GGATTACTAC GTCGGTCTGC GAGAACGGAT CAAGGAAGCT
CGCCAACATA AAGCGGATCT CTTCATTTCC ATCCACGCCG ATGCTTTCAC TCACCCTAAA
GCGCGCGGCT CTTCCGTCTA TATTCTCTCT GAAAAAGGGG CAAGCAGTGA GGCTGCACGC
TATCTCGCCA AAAGGGAGAA TGAATCGGAG TTCATCGGCG GCGTGAATTT AAATGAGAAA
GACGATCTCT TGGCCCGCGT CCTGCTTGAC CTATCCCAAA CCTCCACCCA TGAAGCAAGC
CTGAAAATAG CGGATACTCT CCTTGCCGGA CTCAAAAATG TTGGCCAGGT TCACAGCCAG
CACGTCCAGC ATGCCGGCTT TGCCGTACTC AAATCTCCCG ATATTCCCTC AGTATTGATA
GAAACCGCTT TTATTTCTAA CCCCCACGAA GAACGGCAGT TGCGCAGCCA AACCCATCAA
CAGCAATTAG CAAACGCGAT GATGAATGGC ATTCGGTACT ATTTCTATAG CAATCCCCTA
CCAGACACCC TCCTCGCTCA GCGCCGCCAC ATCATCAATC GCGGCGATAC CCTCTCTGGT
GTTGCCCAAC ATTATGATGT GAGCCTCAAT CAACTGCGTT TAGCTAATGA TCTCAAGGGC
GATCGCATCC ACGTAGGAGA TATCTTGCTG ATTCCTTGA
 
Protein sequence
MKRIAYFLIC LVPVLAFAGV QVQGVRVWSA EEKTRLVFDL SAPVQHRVFT LASPHRIVID 
LANTRLAQPL PPNSLNGKLL RGLRSANKST GILRVVLELS HAAHAKSFSL KPYKNHSHRL
VIDLTRTDIG ESQQKLVKTV AAITDNKPQQ TTHKIRIAPE NNPPRGNPPQ GGKSEKTQPN
STTIIAAARD KPRDIVIAID AGHGGEDPGA IGPQGTQEKQ VVLAIARKLA RLLDREPGMR
PVMIRKGDYY VGLRERIKEA RQHKADLFIS IHADAFTHPK ARGSSVYILS EKGASSEAAR
YLAKRENESE FIGGVNLNEK DDLLARVLLD LSQTSTHEAS LKIADTLLAG LKNVGQVHSQ
HVQHAGFAVL KSPDIPSVLI ETAFISNPHE ERQLRSQTHQ QQLANAMMNG IRYYFYSNPL
PDTLLAQRRH IINRGDTLSG VAQHYDVSLN QLRLANDLKG DRIHVGDILL IP